SCOPe 2.08: Domain d6vkka1: 6vkk A:662-796

Lineage for d6vkka1 (6vkk A:662-796)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.41: Domain of poly(ADP-ribose) polymerase [47586] (1 superfamily)
   core: 4 helices: bundle; unusual topology

4. Superfamily a.41.1: Domain of poly(ADP-ribose) polymerase [47587] (2 families)
   duplication: consists of 2 helix-loop-helix structural repeats
   automatically mapped to Pfam PF02877

5. Family a.41.1.0: automated matches [227223] (1 protein)
   not a true family

6. Protein automated matches [226964] (2 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [225405] (62 PDB entries)

8. Domain d6vkka1: 6vkk A:662-796 [388011]
   Other proteins in same PDB: d6vkka2, d6vkkb2, d6vkkc2, d6vkkd2
   automated match to d4hhyd1
   complexed with gol, rpb, so4

Details for d6vkka1

PDB Entry: 6vkk, 2.1 Å

PDB Description: crystal structure of human parp-1 cat domain bound to inhibitor rucaparib

PDB Compounds: (A:) Poly [ADP-ribose] polymerase 1

SCOPe Domain Sequences for d6vkka1:

Sequence, based on SEQRES records:

>d6vkka1 a.41.1.0 (A:662-796) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ksklpkpvqdlikmifdvesmkkamveyeidlqkmplgklskrqiqaaysilsevqqavs
qgssdsqildlsnrfytliphdfgmkkppllnnadsvqakaemldnlldievaysllrgg
sddsskdpidvnyek

Sequence, based on observed residues (ATOM records):

>d6vkka1 a.41.1.0 (A:662-796) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ksklpkpvqdlikmifdvesmkkamveyeidlqkmplgklskrqiqaaysilsevqqavs
qgssdsqildlsnrfytliphdfgmkkppllnnadsvqakaemldnlldievaysllrgs
kdpidvnyek

Timeline for d6vkka1:

• d6vkka1 first appeared in SCOPe 2.07