Lineage for d6v47a_ (6v47 A:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2775473Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 2775474Superfamily b.19.1: Viral protein domain [49818] (4 families) (S)
    forms homotrimers
  5. 2776220Family b.19.1.0: automated matches [227246] (1 protein)
    not a true family
  6. 2776221Protein automated matches [227017] (58 species)
    not a true protein
  7. 2776280Species Influenza a virus (a/duck/memphis/546/1974(h11n9)) [TaxId:402474] [387938] (1 PDB entry)
  8. 2776281Domain d6v47a_: 6v47 A: [387962]
    Other proteins in same PDB: d6v47b_, d6v47d_, d6v47f_
    automated match to d3ztna_

Details for d6v47a_

PDB Entry: 6v47 (more details), 2.8 Å

PDB Description: the crystal structure of hemagglutinin from a/duck/memphis/546/1974 (h11n9)
PDB Compounds: (A:) Hemagglutinin HA1 chain

SCOPe Domain Sequences for d6v47a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6v47a_ b.19.1.0 (A:) automated matches {Influenza a virus (a/duck/memphis/546/1974(h11n9)) [TaxId: 402474]}
deicigylsnnstekvdtiiesnvtvtssvelveneytgsfcsidgkapislgdcsfagw
ilgnpmcddligktswsyivekpnpingicypgtleneeelrlkfsgvlefnkfeaftsn
gwgsvnsgagvtaackfgssnsffrnmvwlihqsgtypvirrtfnntkgrdvlmvwgvhh
patlkehqdlykkdnsyvavgsesynrrftpeistrpkvngqagrmtfywtivkpeeait
fesngaflapryafelvslgngklfrsdlniescstkcqseigwintnrsfhsvhrntig
dcpkyvnvkslklatglrnvp

SCOPe Domain Coordinates for d6v47a_:

Click to download the PDB-style file with coordinates for d6v47a_.
(The format of our PDB-style files is described here.)

Timeline for d6v47a_: