Lineage for d5qy5b2 (5qy5 B:170-317)

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. Superfamily a.118.29: U5 small nuclear riboprotein particle assembly factor Aar2 C-terminal domain-like [345916] (1 family) (S)
    C-terminal part of Pfam PF05282
    Structural similarity with VHS domains (48464) noted in PubMed 21764848, but no compelling evidence of homology
  5. Family a.118.29.1: U5 small nuclear riboprotein particle assembly factor Aar2 C-terminal domain-like [345957] (2 proteins)
  6. Protein U5 small nuclear riboprotein particle assembly factor Aar2 C-terminal domain [346042] (1 species)
  7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [346205] (140 PDB entries)
  8. Domain d5qy5b2: 5qy5 B:170-317 [387307]
    Other proteins in same PDB: d5qy5a1, d5qy5a2, d5qy5b1
    automated match to d3sbtb2
    complexed with pgr, so4, sya

Details for d5qy5b2

PDB Entry: 5qy5 (more details), 1.51 Å

PDB Description: pandda analysis group deposition -- aar2/rnaseh in complex with fragment f2x-entry c02a
PDB Compounds: (B:) A1 cistron-splicing factor AAR2

SCOPe Domain Sequences for d5qy5b2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5qy5b2 a.118.29.1 (B:170-317) U5 small nuclear riboprotein particle assembly factor Aar2 C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
sdpahslnytvinfksreairpghemedfldksyylntvmlqgifknssnyfgelqfafl
namffgnygsslqwhamielicssatvpkhmldkldeilyyqiktlpeqysdillnervw
niclyssfqknslhntekimenkypell

SCOPe Domain Coordinates for d5qy5b2 are not available.

Timeline for d5qy5b2:

Domains from same chain:
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d5qy5b1
Domains from other chains:
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d5qy5a1, d5qy5a2