Lineage for d5qyob1 (5qyo B:1-152)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2413212Fold b.182: U5 small nuclear riboprotein particle assembly factor Aar2 N-terminal domain-like [345889] (1 superfamily)
    10-stranded mixed beta sandwich with 3 helices surrounding the upper rim
  4. 2413213Superfamily b.182.1: U5 small nuclear riboprotein particle assembly factor Aar2 N-terminal domain-like [345922] (1 family) (S)
    N-terminal part of Pfam PF05282
  5. 2413214Family b.182.1.1: U5 small nuclear riboprotein particle assembly factor Aar2 N-terminal domain-like [345967] (2 proteins)
  6. 2413215Protein U5 small nuclear riboprotein particle assembly factor Aar2 N-terminal domain [346065] (1 species)
  7. 2413216Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [346269] (140 PDB entries)
  8. 3087196Domain d5qyob1: 5qyo B:1-152 [387258]
    Other proteins in same PDB: d5qyoa1, d5qyoa2, d5qyob2
    automated match to d3sbtb1

Details for d5qyob1

PDB Entry: 5qyo (more details), 1.58 Å

PDB Description: pandda analysis group deposition -- auto-refined data of aar2/rnaseh for ground state model 04
PDB Compounds: (B:) A1 cistron-splicing factor AAR2

SCOPe Domain Sequences for d5qyob1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5qyob1 b.182.1.1 (B:1-152) U5 small nuclear riboprotein particle assembly factor Aar2 N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
mntvpftsapievtigidqysfnvkenqpfhgikdipighvhvihfqhadnssmrygywf
dcrmgnfyiqydpkdglykmmeerdgakfenivhnfkerqmmvsypkideddtwynltef
vqmdkirkivrkdenqfsyvdssmttvqenel

SCOPe Domain Coordinates for d5qyob1:

Click to download the PDB-style file with coordinates for d5qyob1.
(The format of our PDB-style files is described here.)

Timeline for d5qyob1:

  • d5qyob1 is new in SCOPe 2.07-stable

View in 3D
Domains from same chain:
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d5qyob2