SCOPe 2.08: Domain d6jz6a3: 6jz6 A:279-597

Lineage for d6jz6a3 (6jz6 A:279-597)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.0: automated matches [191314] (1 protein)
   not a true family

6. Protein automated matches [190075] (132 species)
   not a true protein

7. Species Ruminococcus gnavus [TaxId:33038] [361249] (8 PDB entries)

8. Domain d6jz6a3: 6jz6 A:279-597 [387199]
   Other proteins in same PDB: d6jz6a1, d6jz6a2, d6jz6b1, d6jz6b2
   automated match to d5c70a3
   complexed with ckx

Details for d6jz6a3

PDB Entry: 6jz6, 1.61 Å

PDB Description: b-glucuronidase from ruminococcus gnavus in complex with c6- substituted uronic isofagomine

PDB Compounds: (A:) beta-glucuronidase

SCOPe Domain Sequences for d6jz6a3:

Sequence, based on SEQRES records:

>d6jz6a3 c.1.8.0 (A:279-597) automated matches {Ruminococcus gnavus [TaxId: 33038]}
vriegtkillndrpvylkgfgkhedfpilgrgfhwgivkrdfeclkwtnancfrtshypy
aeewyqfadeegfliidevpavgmmrstrnfvaagsgnytyffealtvpellkshiadte
emitrdknhpsviawslfnepetitdyayeyfkevfaaaetydfqsrpmtgafeknskpe
lckcyplcdficlnryygwyisggpeieeaeelfrdemdrwkakelnvpfvftefgtdtm
aglhklpsimwseeyqkeylemnfrvfdsyefvqgelawnfadfqttegimrvdgnhkgv
ftrdrqpkaaavvfkdrwe

Sequence, based on observed residues (ATOM records):

>d6jz6a3 c.1.8.0 (A:279-597) automated matches {Ruminococcus gnavus [TaxId: 33038]}
vriegtkillndrpvylkgfgkhedfpilgrgfhwgivkrdfeclkwtnancfrtshypy
aeewyqfadeegfliidevpavgmmffealtvpellkshiadteemitrdknhpsviaws
lfnepetitdyayeyfkevfaaaetydfqsrpmtgafeknskpelckcyplcdficlnry
ygwyisggpeieeaeelfrdemdrwkakelnvpfvftefgtdtmaglhklpsimwseeyq
keylemnfrvfdsyefvqgelawnfadfqttegimrvdgnhkgvftrdrqpkaaavvfkd
rwe

Timeline for d6jz6a3:

• d6jz6a3 first appeared in SCOPe 2.07