Lineage for d5rdca_ (5rdc A:)

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. Family b.50.1.2: Pepsin-like [50646] (11 proteins)
    duplication: consists of two similar barrel domains
    N-terminal: barrel, partly opened; n*=6, S*=10
  6. Protein automated matches [190156] (5 species)
    not a true protein
  7. Species Cryphonectria parasitica [TaxId:5116] [187236] (191 PDB entries)
  8. Domain d5rdca_: 5rdc A: [386907]
    automated match to d1oewa_
    complexed with act, gol, na, peg, pg4, pge

Details for d5rdca_

PDB Entry: 5rdc (more details), 1.02 Å

PDB Description: pandda analysis group deposition -- endothiapepsin ground state model 34
PDB Compounds: (A:) endothiapepsin

SCOPe Domain Sequences for d5rdca_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5rdca_ b.50.1.2 (A:) automated matches {Cryphonectria parasitica [TaxId: 5116]}
stgsatttpidslddayitpvqigtpaqtlnldfdtgssdlwvfssettasevdgqtiyt
psksttakllsgatwsisygdgssssgdvytdtvsvggltvtgqavesakkvsssfteds
tidgllglafstlntvsptqqktffdnakasldspvftadlgyhapgtynfgfidttayt
gsitytavstkqgfwewtstgyavgsgtfkstsidgiadtgttllylpatvvsaywaqvs
gakssssvggyvfpcsatlpsftfgvgsarivipgdyidfgpistgssscfggiqssagi
ginifgdvalkaafvvfngattptlgfask

SCOPe Domain Coordinates for d5rdca_ are not available.

Timeline for d5rdca_: