SCOPe 2.08: Domain d6quja1: 6quj A:2-230

Lineage for d6quja1 (6quj A:2-230)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.22: GFP-like [54510] (1 superfamily)
   beta-sheet folds into a barrel (n=11, S=14) around the central helix

4. Superfamily d.22.1: GFP-like [54511] (3 families)

5. Family d.22.1.1: Fluorescent proteins [54512] (6 proteins)

6. Protein Green fluorescent protein, GFP [54513] (6 species)

7. Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (285 PDB entries)
   Uniprot P42212

8. Domain d6quja1: 6quj A:2-230 [386253]
   Other proteins in same PDB: d6quja2, d6qujd2
   automated match to d2b3pa_
   complexed with cro, cu, gol, so4

Details for d6quja1

PDB Entry: 6quj, 1.68 Å

PDB Description: ghk tagged gfp variant

PDB Compounds: (A:) Green fluorescent protein

SCOPe Domain Sequences for d6quja1:

Sequence, based on SEQRES records:

>d6quja1 d.22.1.1 (A:2-230) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}
krgeqlftgvvpilveldgdvnghrfsvrgegegdatngrltlrficttgrlpvpwptlv
ttlgygvqcfsrypdhmrrhdffksampegyvqertisfrddgtyrtravvrfegntlvn
rielrgtnfredgnilghrleynynshnvyitadrqrngiranftirhnvedgsvqlanh
yqqntpigngpvllpddhylstqtalsrdpnerrdhmvllefvtaagit

Sequence, based on observed residues (ATOM records):

>d6quja1 d.22.1.1 (A:2-230) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}
krgeqlftgvvpilveldgdvnghrfsvrgegegdatngrltlrficttgrlpvpwptlv
ttlvqcfsrypdhmrrhdffksampegyvqertisfrddgtyrtravvrfegntlvnrie
lrgtnfredgnilghrleynynshnvyitadrqrngiranftirhnvedgsvqlanhyqq
ntpigngpvllpddhylstqtalsrdpnerrdhmvllefvtaagit

Timeline for d6quja1:

• d6quja1 first appeared in SCOPe 2.07, called d6quja_