SCOPe 2.08: Domain d6v28d1: 6v28 D:1-326

Lineage for d6v28d1 (6v28 D:1-326)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.88: Glutaminase/Asparaginase [53773] (1 superfamily)
   consists of two non-similar alpha/beta domains, 3 layers (a/b/a) each
   Domain 1 has mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest; left-handed crossover connection between strands 4 and 5
   Domain 2 has parallel beta-sheet of 4 strands, order 1234

4. Superfamily c.88.1: Glutaminase/Asparaginase [53774] (2 families)

5. Family c.88.1.1: Glutaminase/Asparaginase [53775] (4 proteins)
   automatically mapped to Pfam PF00710

6. Protein Asparaginase type II [53776] (5 species)

7. Species Escherichia coli [TaxId:562] [53777] (42 PDB entries)

8. Domain d6v28d1: 6v28 D:1-326 [385943]
   Other proteins in same PDB: d6v28c2, d6v28d2
   automated match to d4ecaa_
   complexed with aei, gol, imd; mutant

Details for d6v28d1

PDB Entry: 6v28, 1.95 Å

PDB Description: complex of double mutant (t89v,k162t) of e. coli l-asparaginase ii with l-asp

PDB Compounds: (D:) L-asparaginase 2

SCOPe Domain Sequences for d6v28d1:

Sequence; same for both SEQRES and ATOM records:

>d6v28d1 c.88.1.1 (D:1-326) Asparaginase type II {Escherichia coli [TaxId: 562]}
lpnitilatggdiagggdsatksnytvgkvgvenlvnavpqlkdianvkgeqvvnigsqd
mndnvwltlakkintdcdktdgfvithgvdtmeetayfldltvkcdkpvvmvgamrpsts
msadgpfnlynavvtaadkasanrgvlvvmndtvldgrdvtttnttdvatfksvnygplg
yihngkidyqrtparkhtsdtpfdvsklnelpkvgivynyanasdlpakalvdagydgiv
sagvgngnlyksvfdtlataaktgtavvrssrvptgattqdaevddakygfvasgtlnpq
karvllqlaltqtkdpqqiqqifnqy

Timeline for d6v28d1:

• d6v28d1 first appeared in SCOPe 2.07