SCOPe 2.07: Domain d6vh6a1: 6vh6 A:470-607

Lineage for d6vh6a1 (6vh6 A:470-607)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.8: Viral DNA-binding domain [54957] (1 family)

5. Family d.58.8.1: Viral DNA-binding domain [54958] (3 proteins)

6. Protein Epstein barr virus nuclear antigen-1 (ebna1) [54964] (2 species)
   DNA-binding mode differs from that of E2 protein

7. Species Epstein-barr virus (strain b95-8) [TaxId:10377] [385181] (1 PDB entry)

8. Domain d6vh6a1: 6vh6 A:470-607 [385182]
   Other proteins in same PDB: d6vh6a2
   automated match to d1vhia_
   protein/DNA complex; complexed with qx4

Details for d6vh6a1

PDB Entry: 6vh6, 1.3 Å

PDB Description: crystal structure of epstein-barr virus nuclear antigen-1, ebna1, bound to fragment

PDB Compounds: (A:) Epstein-Barr nuclear antigen 1

SCOPe Domain Sequences for d6vh6a1:

Sequence; same for both SEQRES and ATOM records:

>d6vh6a1 d.58.8.1 (A:470-607) Epstein barr virus nuclear antigen-1 (ebna1) {Epstein-barr virus (strain b95-8) [TaxId: 10377]}
gqggsnpkfeniaeglrallarshverttdegtwvagvfvyggsktslynlrrgtalaip
qcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpap
tcnirvtvcsfddgvdlp

Timeline for d6vh6a1:

• d6vh6a1 is new in SCOPe 2.07-stable
  
• d6vh6a1 appears in the current release, SCOPe 2.08