Lineage for Species: Epstein-barr virus (strain b95-8) [TaxId: 10377]

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2949054Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2952704Superfamily d.58.8: Viral DNA-binding domain [54957] (1 family) (S)
  5. 2952705Family d.58.8.1: Viral DNA-binding domain [54958] (3 proteins)
  6. 2952706Protein Epstein barr virus nuclear antigen-1 (ebna1) [54964] (2 species)
    DNA-binding mode differs from that of E2 protein
  7. 2952707Species Epstein-barr virus (strain b95-8) [TaxId:10377] [385181] (5 PDB entries)

PDB entries in Species: Epstein-barr virus (strain b95-8) [TaxId: 10377]:

  1. Domain(s) for 5wmf:
    1. 2952715Domain d5wmfa_: 5wmf A: [337644]
      automated match to d1b3ta_
      has additional insertions and/or extensions that are not grouped together
    2. 2952716Domain d5wmfb_: 5wmf B: [337709]
      automated match to d1b3ta_
      has additional insertions and/or extensions that are not grouped together
    3. 2952717Domain d5wmfc_: 5wmf C: [337690]
      automated match to d1b3ta_
      has additional insertions and/or extensions that are not grouped together
    4. 2952718Domain d5wmfd_: 5wmf D: [337646]
      automated match to d1b3ta_
      has additional insertions and/or extensions that are not grouped together
    5. 2952719Domain d5wmfe_: 5wmf E: [337648]
      automated match to d1b3ta_
      has additional insertions and/or extensions that are not grouped together
    6. 2952720Domain d5wmff_: 5wmf F: [337750]
      automated match to d1b3ta_
      has additional insertions and/or extensions that are not grouped together
  2. Domain(s) for 6npi:
    1. 2952711Domain d6npia1: 6npi A:471-607 [366616]
      Other proteins in same PDB: d6npia2
      automated match to d1b3ta_
      protein/DNA complex; complexed with 60q, kw1

      has additional insertions and/or extensions that are not grouped together
    2. 2952712Domain d6npib_: 6npi B: [366611]
      Other proteins in same PDB: d6npia2
      automated match to d1b3ta_
      protein/DNA complex; complexed with 60q, kw1

      has additional insertions and/or extensions that are not grouped together
  3. Domain(s) for 6npm:
    1. 2952713Domain d6npma1: 6npm A:471-607 [366607]
      Other proteins in same PDB: d6npma2
      automated match to d1b3ta_
      protein/DNA complex; complexed with kvd

      has additional insertions and/or extensions that are not grouped together
    2. 2952714Domain d6npmb_: 6npm B: [366655]
      Other proteins in same PDB: d6npma2
      automated match to d1b3ta_
      protein/DNA complex; complexed with kvd

      has additional insertions and/or extensions that are not grouped together
  4. Domain(s) for 6npp:
    • 2952710Domain d6nppa1: 6npp A:471-607 [366600]
      Other proteins in same PDB: d6nppa2, d6nppb_
      automated match to d1b3ta_
      protein/DNA complex; complexed with kwg

      has additional insertions and/or extensions that are not grouped together
  5. Domain(s) for 6vh6:
    1. 2952708Domain d6vh6a1: 6vh6 A:470-607 [385182]
      Other proteins in same PDB: d6vh6a2
      automated match to d1vhia_
      protein/DNA complex; complexed with qx4

      has additional insertions and/or extensions that are not grouped together
    2. 2952709Domain d6vh6b_: 6vh6 B: [385204]
      Other proteins in same PDB: d6vh6a2
      automated match to d1vhia_
      protein/DNA complex; complexed with qx4

      has additional insertions and/or extensions that are not grouped together

More info for Species Epstein-barr virus (strain b95-8) [TaxId:10377] from d.58.8.1 Epstein barr virus nuclear antigen-1 (ebna1)

Timeline for Species Epstein-barr virus (strain b95-8) [TaxId:10377] from d.58.8.1 Epstein barr virus nuclear antigen-1 (ebna1):