Lineage for d6u1cb2 (6u1c B:115-319)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2585054Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 2585055Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families) (S)
  5. 2585592Family d.142.1.0: automated matches [227184] (1 protein)
    not a true family
  6. 2585593Protein automated matches [226904] (38 species)
    not a true protein
  7. 2585748Species Thermus thermophilus [TaxId:300852] [346384] (13 PDB entries)
  8. 2585772Domain d6u1cb2: 6u1c B:115-319 [385105]
    Other proteins in same PDB: d6u1ca1, d6u1ca3, d6u1ca4, d6u1cb1, d6u1cc1, d6u1cc3, d6u1cc4, d6u1cd1
    automated match to d2fb9a2

Details for d6u1cb2

PDB Entry: 6u1c (more details), 2.2 Å

PDB Description: apo form of thermus thermophilus d-alanine-d-alanine ligase
PDB Compounds: (B:) d-alanine--d-alanine ligase

SCOPe Domain Sequences for d6u1cb2:

Sequence, based on SEQRES records: (download)

>d6u1cb2 d.142.1.0 (B:115-319) automated matches {Thermus thermophilus [TaxId: 300852]}
dkdlskrvlaqagvpvvpwvavrkgeppvvpfdppffvkpantgssvgisrverfqdlea
alalafrydekavvekalspvrelevgvlgnvfgeaspvgevryeapfydyetkytpgra
ellipapldpgtqetvqelalkaykvlgvrgmarvdfflaegelylnelntipgftptsm
yprlfeaggvaypellrrlvelalt

Sequence, based on observed residues (ATOM records): (download)

>d6u1cb2 d.142.1.0 (B:115-319) automated matches {Thermus thermophilus [TaxId: 300852]}
dkdlskrvlaqagvpvvpwvavrkgeppvvpfdppffvkpantgssvgisrverfqdlea
alalafrydekavvekalspvrelevgvlgnvfgeaspvgevrellipapldpgtqetvq
elalkaykvlgvrgmarvdfflaegelylnelntipgftptsmyprlfeaggvaypellr
rlvelalt

SCOPe Domain Coordinates for d6u1cb2:

Click to download the PDB-style file with coordinates for d6u1cb2.
(The format of our PDB-style files is described here.)

Timeline for d6u1cb2: