Lineage for d6sqsc1 (6sqs C:1-76)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2538334Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2538335Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2538336Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2538652Protein Ubiquitin [54238] (9 species)
  7. 2538766Species Human (Homo sapiens) [TaxId:9606] [54239] (307 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2538942Domain d6sqsc1: 6sqs C:1-76 [385093]
    Other proteins in same PDB: d6sqsb_, d6sqsc2, d6sqse_, d6sqsf2
    automated match to d4k1rb_
    complexed with sep, zn

Details for d6sqsc1

PDB Entry: 6sqs (more details), 1.83 Å

PDB Description: crystal structure of cat phospho-ser429 mdm2 ring domain bound to ubch5b-ub
PDB Compounds: (C:) Ubiquitin-40S ribosomal protein S27a

SCOPe Domain Sequences for d6sqsc1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6sqsc1 d.15.1.1 (C:1-76) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

SCOPe Domain Coordinates for d6sqsc1:

Click to download the PDB-style file with coordinates for d6sqsc1.
(The format of our PDB-style files is described here.)

Timeline for d6sqsc1: