Lineage for Species: Severe acute respiratory syndrome coronavirus 2 [TaxId: 2697049]

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2538334Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2538335Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2540226Family d.15.1.0: automated matches [191343] (1 protein)
    not a true family
  6. 2540227Protein automated matches [190233] (31 species)
    not a true protein
  7. 2540644Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [383234] (33 PDB entries)

PDB entries in Species: Severe acute respiratory syndrome coronavirus 2 [TaxId: 2697049]:

  1. Domain(s) for 6w9c:
    1. 2540692Domain d6w9ca1: 6w9c A:3-61 [383284]
      Other proteins in same PDB: d6w9ca2, d6w9cb2, d6w9cc2
      automated match to d5tl6b1
      complexed with cl, zn
    2. 2540693Domain d6w9cb1: 6w9c B:4-61 [383235]
      Other proteins in same PDB: d6w9ca2, d6w9cb2, d6w9cc2
      automated match to d5tl6b1
      complexed with cl, zn
    3. 2540694Domain d6w9cc1: 6w9c C:4-61 [383254]
      Other proteins in same PDB: d6w9ca2, d6w9cb2, d6w9cc2
      automated match to d5tl6b1
      complexed with cl, zn
  2. Domain(s) for 6wrh:
  3. Domain(s) for 6wzu:
  4. Domain(s) for 6xa9:
    1. 2540695Domain d6xa9a1: 6xa9 A:2-61 [388065]
      Other proteins in same PDB: d6xa9a2, d6xa9c2, d6xa9e2
      automated match to d5tl6b1
      complexed with gol, zn
    2. 2540696Domain d6xa9c1: 6xa9 C:2-61 [388045]
      Other proteins in same PDB: d6xa9a2, d6xa9c2, d6xa9e2
      automated match to d5tl6b1
      complexed with gol, zn
    3. 2540697Domain d6xa9e1: 6xa9 E:5-61 [388093]
      Other proteins in same PDB: d6xa9a2, d6xa9c2, d6xa9e2
      automated match to d5tl6b1
      complexed with gol, zn
  5. Domain(s) for 6xaa:
  6. Domain(s) for 6xg3:
  7. Domain(s) for 6yva:
  8. Domain(s) for 7cjd:
    1. 2540672Domain d7cjda1: 7cjd A:6-61 [389946]
      Other proteins in same PDB: d7cjda2, d7cjdb2, d7cjdc2, d7cjdd2
      automated match to d4m0wa1
      complexed with edo, zn; mutant
    2. 2540673Domain d7cjdb1: 7cjd B:2-61 [389970]
      Other proteins in same PDB: d7cjda2, d7cjdb2, d7cjdc2, d7cjdd2
      automated match to d4m0wa1
      complexed with edo, zn; mutant
    3. 2540674Domain d7cjdc1: 7cjd C:3-61 [389961]
      Other proteins in same PDB: d7cjda2, d7cjdb2, d7cjdc2, d7cjdd2
      automated match to d4m0wa1
      complexed with edo, zn; mutant
    4. 2540675Domain d7cjdd1: 7cjd D:1-61 [389933]
      Other proteins in same PDB: d7cjda2, d7cjdb2, d7cjdc2, d7cjdd2
      automated match to d4m0wa1
      complexed with edo, zn; mutant
  9. Domain(s) for 7cmd:
    1. 2540677Domain d7cmda1: 7cmd A:1-61 [390001]
      Other proteins in same PDB: d7cmda2, d7cmda3, d7cmdb2, d7cmdb3, d7cmdc2, d7cmdc3, d7cmdd2, d7cmdd3
      automated match to d4m0wa1
      complexed with ttt, zn
    2. 2540678Domain d7cmdb1: 7cmd B:1-61 [389991]
      Other proteins in same PDB: d7cmda2, d7cmda3, d7cmdb2, d7cmdb3, d7cmdc2, d7cmdc3, d7cmdd2, d7cmdd3
      automated match to d4m0wa1
      complexed with ttt, zn
    3. 2540679Domain d7cmdc1: 7cmd C:1-61 [390096]
      Other proteins in same PDB: d7cmda2, d7cmda3, d7cmdb2, d7cmdb3, d7cmdc2, d7cmdc3, d7cmdd2, d7cmdd3
      automated match to d4m0wa1
      complexed with ttt, zn
    4. 2540680Domain d7cmdd1: 7cmd D:1-61 [390025]
      Other proteins in same PDB: d7cmda2, d7cmda3, d7cmdb2, d7cmdb3, d7cmdc2, d7cmdc3, d7cmdd2, d7cmdd3
      automated match to d4m0wa1
      complexed with ttt, zn
  10. Domain(s) for 7d47:
    1. 2540653Domain d7d47a1: 7d47 A:3-61 [390099]
      Other proteins in same PDB: d7d47a2, d7d47b2
      automated match to d4m0wa1
      complexed with ca, zn
    2. 2540654Domain d7d47b1: 7d47 B:4-61 [390089]
      Other proteins in same PDB: d7d47a2, d7d47b2
      automated match to d4m0wa1
      complexed with ca, zn
  11. Domain(s) for 7d6h:
  12. Domain(s) for 7d7k:
    1. 2540647Domain d7d7ka1: 7d7k A:4-61 [403182]
      Other proteins in same PDB: d7d7ka2, d7d7kb2
      automated match to d4m0wa1
      complexed with cff, edo, so4, zn
    2. 2540648Domain d7d7kb1: 7d7k B:4-61 [403285]
      Other proteins in same PDB: d7d7ka2, d7d7kb2
      automated match to d4m0wa1
      complexed with cff, edo, so4, zn
  13. Domain(s) for 7d7l:
    1. 2540660Domain d7d7la1: 7d7l A:4-61 [403208]
      Other proteins in same PDB: d7d7la2, d7d7lb2
      automated match to d4m0wa1
      complexed with cff, gol, gxu, so4, zn
    2. 2540661Domain d7d7lb1: 7d7l B:4-61 [403214]
      Other proteins in same PDB: d7d7la2, d7d7lb2
      automated match to d4m0wa1
      complexed with cff, gol, gxu, so4, zn
  14. Domain(s) for 7d7t:
    1. 2540689Domain d7d7ta1: 7d7t A:2-62 [394500]
      Other proteins in same PDB: d7d7ta2, d7d7tb2
      automated match to d4m0wa1
      complexed with gyx, zn; mutant
    2. 2540690Domain d7d7tb1: 7d7t B:2-62 [394496]
      Other proteins in same PDB: d7d7ta2, d7d7tb2
      automated match to d4m0wa1
      complexed with gyx, zn; mutant
  15. Domain(s) for 7e35:
  16. Domain(s) for 7jir:
  17. Domain(s) for 7jit:
  18. Domain(s) for 7jiv:
  19. Domain(s) for 7jiw:
  20. Domain(s) for 7jn2:
  21. Domain(s) for 7jrn:
    1. 2540670Domain d7jrna1: 7jrn A:1-61 [390294]
      Other proteins in same PDB: d7jrna2, d7jrnj2
      automated match to d5tl6b1
      complexed with so4, ttt, zn
    2. 2540671Domain d7jrnj1: 7jrn J:1-61 [390298]
      Other proteins in same PDB: d7jrna2, d7jrnj2
      automated match to d5tl6b1
      complexed with so4, ttt, zn
  22. Domain(s) for 7koj:
  23. Domain(s) for 7kok:
  24. Domain(s) for 7kol:
  25. Domain(s) for 7krx:
  26. Domain(s) for 7lbr:
    1. 2540664Domain d7lbra1: 7lbr A:1-61 [399507]
      Other proteins in same PDB: d7lbra2, d7lbra3, d7lbrb2, d7lbrb3
      automated match to d5tl6b1
      complexed with gol, so4, xt7, zn
    2. 2540665Domain d7lbrb1: 7lbr B:1-61 [399495]
      Other proteins in same PDB: d7lbra2, d7lbra3, d7lbrb2, d7lbrb3
      automated match to d5tl6b1
      complexed with gol, so4, xt7, zn
  27. Domain(s) for 7lbs:
    1. 2540682Domain d7lbsa1: 7lbs A:1-61 [399472]
      Other proteins in same PDB: d7lbsa2, d7lbsa3, d7lbsb2, d7lbsb3
      automated match to d5tl6b1
      complexed with bo3, gol, so4, xr8, zn
    2. 2540683Domain d7lbsb1: 7lbs B:1-61 [399492]
      Other proteins in same PDB: d7lbsa2, d7lbsa3, d7lbsb2, d7lbsb3
      automated match to d5tl6b1
      complexed with bo3, gol, so4, xr8, zn
  28. Domain(s) for 7llf:
    1. 2540666Domain d7llfa1: 7llf A:1-61 [399948]
      Other proteins in same PDB: d7llfa2, d7llfa3, d7llfb2, d7llfb3
      automated match to d5tl6b1
      complexed with bo3, gol, so4, y54, zn
    2. 2540667Domain d7llfb1: 7llf B:1-61 [399914]
      Other proteins in same PDB: d7llfa2, d7llfa3, d7llfb2, d7llfb3
      automated match to d5tl6b1
      complexed with bo3, gol, so4, y54, zn
  29. Domain(s) for 7llz:
    1. 2540684Domain d7llza1: 7llz A:1-61 [399908]
      Other proteins in same PDB: d7llza2, d7llza3, d7llzb2, d7llzb3
      automated match to d5tl6b1
      complexed with so4, y61, zn
    2. 2540685Domain d7llzb1: 7llz B:1-61 [399820]
      Other proteins in same PDB: d7llza2, d7llza3, d7llzb2, d7llzb3
      automated match to d5tl6b1
      complexed with so4, y61, zn
  30. Domain(s) for 7los:
    1. 2540686Domain d7losa1: 7los A:1-61 [399864]
      Other proteins in same PDB: d7losa2, d7losa3, d7losb2, d7losb3
      automated match to d5tl6b1
      complexed with cl, so4, y97, zn
    2. 2540687Domain d7losb1: 7los B:1-61 [399740]
      Other proteins in same PDB: d7losa2, d7losa3, d7losb2, d7losb3
      automated match to d5tl6b1
      complexed with cl, so4, y97, zn
  31. Domain(s) for 7m1y:
    1. 2540657Domain d7m1ya1: 7m1y A:2-61 [402369]
      Other proteins in same PDB: d7m1ya2, d7m1yb2
      automated match to d4m0wa1
      complexed with 9jt, cl, fmt, gol, iod, na, zn; mutant
    2. 2540658Domain d7m1yb1: 7m1y B:3-61 [402363]
      Other proteins in same PDB: d7m1ya2, d7m1yb2
      automated match to d4m0wa1
      complexed with 9jt, cl, fmt, gol, iod, na, zn; mutant
  32. Domain(s) for 7ofs:
  33. Domain(s) for 7oft:

More info for Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] from d.15.1.0 automated matches

Timeline for Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] from d.15.1.0 automated matches: