Lineage for d6obgd_ (6obg D:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2739519Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2742100Protein automated matches [190119] (24 species)
    not a true protein
  7. 2745477Species Vicugna pacos [TaxId:30538] [189756] (82 PDB entries)
  8. 2745511Domain d6obgd_: 6obg D: [383106]
    Other proteins in same PDB: d6obga_, d6obgb_
    automated match to d4b41a_
    complexed with cl, zn

Details for d6obgd_

PDB Entry: 6obg (more details), 2 Å

PDB Description: ricin a chain bound to vhh antibody v8e6
PDB Compounds: (D:) VHH antibody V8E6

SCOPe Domain Sequences for d6obgd_:

Sequence, based on SEQRES records: (download)

>d6obgd_ b.1.1.1 (D:) automated matches {Vicugna pacos [TaxId: 30538]}
qlvetggglvqpggslrlscaasgsifsinamgwyrqapgkerelvadisssgrineads
vkgrftisrdnakntvylqmnslkpedtavyycnvlagshyydeyeywgqgtqvtvs

Sequence, based on observed residues (ATOM records): (download)

>d6obgd_ b.1.1.1 (D:) automated matches {Vicugna pacos [TaxId: 30538]}
qlvetggglvqpggslrlscaasgsifsinamgwyrqapkerelvadisssgrineadsv
kgrftisrdnakntvylqmnslkpedtavyycnvlagshyydeyeywgqgtqvtvs

SCOPe Domain Coordinates for d6obgd_:

Click to download the PDB-style file with coordinates for d6obgd_.
(The format of our PDB-style files is described here.)

Timeline for d6obgd_: