Lineage for d6odlb_ (6odl B:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2913607Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2913608Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2915150Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. 2915151Protein automated matches [190039] (161 species)
    not a true protein
  7. 2915760Species Norway rat (Rattus norvegicus) [TaxId:10116] [186759] (113 PDB entries)
  8. 2915895Domain d6odlb_: 6odl B: [383070]
    automated match to d4nf5b_
    complexed with m7v

Details for d6odlb_

PDB Entry: 6odl (more details), 2.3 Å

PDB Description: crystal structure of glun2a agonist binding domain with 4-butyl-(s)- ccg-iv
PDB Compounds: (B:) Glutamate receptor ionotropic, NMDA 2A,Glutamate receptor ionotropic, NMDA 2A

SCOPe Domain Sequences for d6odlb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6odlb_ c.94.1.0 (B:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
nhlsivtleeapfvivedidpltetcvrntvpcrkfvkinnstnegmnvkkcckgfcidi
lkklsrtvkftydlylvtngkhgkkvnnvwngmigevvyqravmavgsltineersevvd
fsvpfvetgisvmvsrgtqvtglsdkkfqrphdysppfrfgtvpngsternirnnypymh
qymtrfnqrgvedalvslktgkldafiydaavlnykagrdegcklvtigsgyifattgyg
ialqkgspwkrqidlallqfvgdgemeeletlwltgich

SCOPe Domain Coordinates for d6odlb_:

Click to download the PDB-style file with coordinates for d6odlb_.
(The format of our PDB-style files is described here.)

Timeline for d6odlb_: