SCOPe 2.08: Domain d6kx6a1: 6kx6 A:2-205

Lineage for d6kx6a1 (6kx6 A:2-205)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.28: Cryptochrome/photolyase, N-terminal domain [52424] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like

4. Superfamily c.28.1: Cryptochrome/photolyase, N-terminal domain [52425] (2 families)
   automatically mapped to Pfam PF00875

5. Family c.28.1.0: automated matches [227292] (1 protein)
   not a true family

6. Protein automated matches [227113] (4 species)
   not a true protein

7. Species Mouse (Mus musculus) [TaxId:10090] [226619] (17 PDB entries)

8. Domain d6kx6a1: 6kx6 A:2-205 [383032]
   Other proteins in same PDB: d6kx6a2, d6kx6b2
   automated match to d4mlpa1
   complexed with dyu

Details for d6kx6a1

PDB Entry: 6kx6, 2 Å

PDB Description: crystal structure of mouse cryptochrome 1 in complex with kl101 compound

PDB Compounds: (A:) Cryptochrome-1

SCOPe Domain Sequences for d6kx6a1:

Sequence, based on SEQRES records:

>d6kx6a1 c.28.1.0 (A:2-205) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
gvnavhwfrkglrlhdnpalkeciqgadtircvyildpwfagssnvginrwrfllqcled
ldanlrklnsrlfvirgqpadvfprlfkewnitklsieydsepfgkerdaaikklateag
vevivrishtlydldkiielnggqppltykrfqtlvskmeplempadtitsdvigkcmtp
lsddhdekygvpsleelgfdtdgl

Sequence, based on observed residues (ATOM records):

>d6kx6a1 c.28.1.0 (A:2-205) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
gvnavhwfrkglrlhdnpalkeciqgadtircvyildpnvginrwrfllqcledldanlr
klnsrlfvirgqpadvfprlfkewnitklsieydsepfgkerdaaikklateagvevivr
ishtlydldkiielnggqppltykrfqtlvskmeplempadtitsdvigkcmtplsddhd
ekygvpsleelgfdtdgl

Timeline for d6kx6a1:

• d6kx6a1 first appeared in SCOPe 2.07