Lineage for d5rfka_ (5rfk A:)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2404157Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 2404158Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. 2406861Family b.47.1.4: Viral cysteine protease of trypsin fold [50603] (5 proteins)
  6. 2407160Protein automated matches [190384] (21 species)
    not a true protein
  7. 2407387Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [382084] (300 PDB entries)
  8. 2407603Domain d5rfka_: 5rfk A: [382703]
    automated match to d3ea8a_
    complexed with dms, t7d

Details for d5rfka_

PDB Entry: 5rfk (more details), 1.75 Å

PDB Description: pandda analysis group deposition -- crystal structure of sars-cov-2 main protease in complex with pcm-0102575
PDB Compounds: (A:) main protease

SCOPe Domain Sequences for d5rfka_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5rfka_ b.47.1.4 (A:) automated matches {Severe acute respiratory syndrome coronavirus 2 [TaxId: 2697049]}
sgfrkmafpsgkvegcmvqvtcgtttlnglwlddvvycprhvictsedmlnpnyedllir
ksnhnflvqagnvqlrvighsmqncvlklkvdtanpktpkykfvriqpgqtfsvlacyng
spsgvyqcamrpnftikgsflngscgsvgfnidydcvsfcymhhmelptgvhagtdlegn
fygpfvdrqtaqaagtdttitvnvlawlyaavingdrwflnrftttlndfnlvamkynye
pltqdhvdilgplsaqtgiavldmcaslkellqngmngrtilgsalledeftpfdvvrqc
sgvt

SCOPe Domain Coordinates for d5rfka_:

Click to download the PDB-style file with coordinates for d5rfka_.
(The format of our PDB-style files is described here.)

Timeline for d5rfka_: