SCOP 1.55: Domain d1agba2: 1agb A:1-181

Lineage for d1agba2 (1agb A:1-181)

1. Root: SCOP 1.55

2. Class d: Alpha and beta proteins (a+b) [53931] (184 folds)

3. Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)

4. Superfamily d.19.1: MHC antigen-recognition domain [54452] (1 family)

5. Family d.19.1.1: MHC antigen-recognition domain [54453] (7 proteins)

6. Protein MHC class I, alpha-1 and alpha-2 domains [54468] (18 species)

7. Species Human (Homo sapiens), HLA-B0801 [TaxId:9606] [54473] (5 PDB entries)

8. Domain d1agba2: 1agb A:1-181 [38263]
   Other proteins in same PDB: d1agba1, d1agbb1

Details for d1agba2

PDB Entry: 1agb, 2.2 Å

PDB Description: antagonist hiv-1 gag peptides induce structural changes in hla b8-hiv-1 gag peptide (ggrkkykl-3r mutation)

SCOP Domain Sequences for d1agba2:

Sequence; same for both SEQRES and ATOM records:

>d1agba2 d.19.1.1 (A:1-181) MHC class I, alpha-1 and alpha-2 domains {Human (Homo sapiens), HLA-B0801}
gshsmryfdtamsrpgrgeprfisvgyvddtqfvrfdsdaaspreeprapwieqegpeyw
drntqifktntqtdreslrnlrgyynqseagshtlqsmygcdvgpdgrllrghnqyaydg
kdyialnedlrswtaadtaaqitqrkweaarvaeqdraylegtcvewlrrylengkdtle
r

Timeline for d1agba2:

• d1agba2 appears in SCOP 1.57
  
• d1agba2 appears in the current release, SCOPe 2.08