Lineage for d1agca2 (1agc A:1-181)

  1. Root: SCOP 1.71
  2. 595667Class d: Alpha and beta proteins (a+b) [53931] (286 folds)
  3. 600225Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 600226Superfamily d.19.1: MHC antigen-recognition domain [54452] (1 family) (S)
  5. 600227Family d.19.1.1: MHC antigen-recognition domain [54453] (12 proteins)
  6. 600255Protein Class I MHC, alpha-1 and alpha-2 domains [54468] (22 species)
  7. 600327Species Human (Homo sapiens), HLA-B08 [TaxId:9606] [54473] (7 PDB entries)
  8. 600331Domain d1agca2: 1agc A:1-181 [38261]
    Other proteins in same PDB: d1agca1, d1agcb_
    mutant

Details for d1agca2

PDB Entry: 1agc (more details), 2.1 Å

PDB Description: antagonist hiv-1 gag peptides induce structural changes in hla b8-hiv-1 gag peptide (ggkkkyql-7q mutation)

SCOP Domain Sequences for d1agca2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1agca2 d.19.1.1 (A:1-181) Class I MHC, alpha-1 and alpha-2 domains {Human (Homo sapiens), HLA-B08}
gshsmryfdtamsrpgrgeprfisvgyvddtqfvrfdsdaaspreeprapwieqegpeyw
drntqifktntqtdreslrnlrgyynqseagshtlqsmygcdvgpdgrllrghnqyaydg
kdyialnedlrswtaadtaaqitqrkweaarvaeqdraylegtcvewlrrylengkdtle
r

SCOP Domain Coordinates for d1agca2:

Click to download the PDB-style file with coordinates for d1agca2.
(The format of our PDB-style files is described here.)

Timeline for d1agca2:

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Domains from same chain:
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d1agca1
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Domains from other chains:
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d1agcb_