SCOPe 2.08: Domain d6uxkb1: 6uxk B:1-470

Lineage for d6uxkb1 (6uxk B:1-470)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.4: GABA-aminotransferase-like [53417] (17 proteins)
   formerly omega-Aminoacid:pyruvate aminotransferase-like

6. Protein Serine hydroxymethyltransferase [53429] (7 species)

7. Species Soybean (Glycine max) [TaxId:3847] [380557] (5 PDB entries)

8. Domain d6uxkb1: 6uxk B:1-470 [380617]
   Other proteins in same PDB: d6uxka2, d6uxkb2
   automated match to d5v7ia_
   complexed with edo

Details for d6uxkb1

PDB Entry: 6uxk, 2.1 Å

PDB Description: structure of serine hydroxymethyltransferase 8 from glycine max cultivar forrest complexed with plp

PDB Compounds: (B:) serine hydroxymethyltransferase

SCOPe Domain Sequences for d6uxkb1:

Sequence, based on SEQRES records:

>d6uxkb1 c.67.1.4 (B:1-470) Serine hydroxymethyltransferase {Soybean (Glycine max) [TaxId: 3847]}
mdpvsvwgntplatvdpeihdliekekrrqcrgieliasenftsfaviealgsaltnkys
egmpgnryyggneyidqienlcrsralqafhldaqswgvnvqpysgspanfaaytavlnp
hdrimgldlrsgghlthgyytsggkkisatsiyfeslpykvnsttgyidydrleekaldf
rpkliicggsayprdwdykrfrevadkcgalllcdmahtsglvaaqevnspfeycdivtt
tthkslrgpragmifyrkgpkppkkgqpenavydfedkinfavfpslqggphnhqigala
valkqaaspgfkayakqvkanavalgkylmgkgyslvtggtenhlvlwdlrplgltgykv
eklcdlcnitvnknavfgdssalapggvrigapamtsrglvekdfeqigeflhravtltl
eiqkehgkllkdfnkglvnnkaiedlkadvekfsalfdmpgflvsemkyk

Sequence, based on observed residues (ATOM records):

>d6uxkb1 c.67.1.4 (B:1-470) Serine hydroxymethyltransferase {Soybean (Glycine max) [TaxId: 3847]}
mdpvsvwgntplatvdpeihdliekekrrqcrgieliasenftsfaviealgsaltnkys
egmpgnryyggneyidqienlcrsralqafhldaqswgvnvqpysgspanfaaytavlnp
hdrimgldlrsgghlthgyytsggkkisatsiyfeslpykvnsttgyidydrleekaldf
rpkliicggsayprdwdykrfrevadkcgalllcdmahtsglvaaqevnspfeycdivtt
tthkslrgpragmifyrkgpkppenavydfedkinfavfpslqggphnhqigalavalkq
aaspgfkayakqvkanavalgkylmgkgyslvtggtenhlvlwdlrplgltgykveklcd
lcnitvnknavfgdsapggvrigapamtsrglvekdfeqigeflhravtltleiqkehgk
llkdfnkglvnnkaiedlkadvekfsalfdmpgflvsemkyk

Timeline for d6uxkb1:

• d6uxkb1 first appeared in SCOPe 2.07