SCOPe 2.08: Domain d6vdjb1: 6vdj B:7-155

Lineage for d6vdjb1 (6vdj B:7-155)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (319 species)
   not a true protein

7. Species Apicomplexa sp. [TaxId:2041159] [379703] (3 PDB entries)

8. Domain d6vdjb1: 6vdj B:7-155 [379704]
   Other proteins in same PDB: d6vdja2, d6vdjb2
   automated match to d2ewda3
   complexed with so4, txd

Details for d6vdjb1

PDB Entry: 6vdj, 2 Å

PDB Description: crystal structure of ancestral apicomplexan lactate dehydrogenase with sulfate and nadh4.

PDB Compounds: (B:) lactate dehydrogenase

SCOPe Domain Sequences for d6vdjb1:

Sequence, based on SEQRES records:

>d6vdjb1 c.2.1.0 (B:7-155) automated matches {Apicomplexa sp. [TaxId: 2041159]}
krpkisligsgmiggtmaylcalkelgdvvlfdvvknmpqgkaldlshstsvadtnvkvt
gtnsyedikgsdvviitagltkvpgksdkewsrddllpinakimkevgenikkycpnafv
icitnpldvmvkvlqeasglphnkvcgma

Sequence, based on observed residues (ATOM records):

>d6vdjb1 c.2.1.0 (B:7-155) automated matches {Apicomplexa sp. [TaxId: 2041159]}
krpkisligsgmiggtmaylcalkelgdvvlfdvvknmpqgkaldlshstsvadtnvkvt
gtnsyedikgsdvviitagltkvpgdkewsrddllpinakimkevgenikkycpnafvic
itnpldvmvkvlqeasglphnkvcgma

Timeline for d6vdjb1:

• d6vdjb1 first appeared in SCOPe 2.07