SCOPe 2.08: Domain d6j6td_: 6j6t D:

Lineage for d6j6td_ (6j6t D:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.42: Arginase/deacetylase [52767] (1 superfamily)
   3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456

4. Superfamily c.42.1: Arginase/deacetylase [52768] (3 families)

5. Family c.42.1.0: automated matches [191435] (1 protein)
   not a true family

6. Protein automated matches [190626] (14 species)
   not a true protein

7. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [379190] (1 PDB entry)

8. Domain d6j6td_: 6j6t D: [379228]
   automated match to d5g0ha_
   complexed with k, so4, zn

Details for d6j6td_

PDB Entry: 6j6t, 2.36 Å

PDB Description: crystal structure of hda15 hd domain

PDB Compounds: (D:) Histone deacetylase 15

SCOPe Domain Sequences for d6j6td_:

Sequence, based on SEQRES records:

>d6j6td_ c.42.1.0 (D:) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
tsstavgfdermllhsefevkaqphperpdrlraiaaslatagvfpgrclpinareitkq
elqmvhtsehvdavdttsqllysyftsdtyaneysaraarlaaglcadlatdiftgrvkn
gfalvrppghhagvrhamgfclhnnaavaalvaqaagakkvlivdwdvhhgngtqeifeq
nksvlyislhrheggnfypgtgaadevgsnggegycvnvpwscggvgdkdyifafqhvvl
piasafspdfviisagfdaargdplgccdvtpagysrmtqmlgdlcggkmlvileggynl
rsisasatavikvllgenpenelpiattpsvaglqtvldvlniqlefwpslaisysklls
e

Sequence, based on observed residues (ATOM records):

>d6j6td_ c.42.1.0 (D:) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
tsstavgfdermllhsefevkaqphperpdrlraiaaslatagvfpgrclpinareitkq
elqmvhtsehvdavdttsqllysyftsdtyaneysaraarlaaglcadlatdiftgrvkn
gfalvrppghhagvrhamgfclhnnaavaalvaqaagakkvlivdwdvhhgngtqeifeq
nksvlyislhrheggnfypgtgaadevgsnggegycvnvpwscggvgdkdyifafqhvvl
piasafspdfviisagfdaargdplgccdvtpagysrmtqmlgdlcggkmlvileggynl
rsisasatavikvllgetpsvaglqtvldvlniqlefwpslaisyskllse

Timeline for d6j6td_:

• d6j6td_ first appeared in SCOPe 2.07