Lineage for d6j6ta_ (6j6t A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2873861Fold c.42: Arginase/deacetylase [52767] (1 superfamily)
    3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456
  4. 2873862Superfamily c.42.1: Arginase/deacetylase [52768] (3 families) (S)
  5. 2874326Family c.42.1.0: automated matches [191435] (1 protein)
    not a true family
  6. 2874327Protein automated matches [190626] (14 species)
    not a true protein
  7. 2874424Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [379190] (1 PDB entry)
  8. 2874425Domain d6j6ta_: 6j6t A: [379217]
    automated match to d5g0ha_
    complexed with k, so4, zn

Details for d6j6ta_

PDB Entry: 6j6t (more details), 2.36 Å

PDB Description: crystal structure of hda15 hd domain
PDB Compounds: (A:) Histone deacetylase 15

SCOPe Domain Sequences for d6j6ta_:

Sequence, based on SEQRES records: (download)

>d6j6ta_ c.42.1.0 (A:) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
sstavgfdermllhsefevkaqphperpdrlraiaaslatagvfpgrclpinareitkqe
lqmvhtsehvdavdttsqllysyftsdtyaneysaraarlaaglcadlatdiftgrvkng
falvrppghhagvrhamgfclhnnaavaalvaqaagakkvlivdwdvhhgngtqeifeqn
ksvlyislhrheggnfypgtgaadevgsnggegycvnvpwscggvgdkdyifafqhvvlp
iasafspdfviisagfdaargdplgccdvtpagysrmtqmlgdlcggkmlvileggynlr
sisasatavikvllgenpenelpiattpsvaglqtvldvlniqlefwpslaisyskll

Sequence, based on observed residues (ATOM records): (download)

>d6j6ta_ c.42.1.0 (A:) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
sstavgfdermllhsefevkaqphperpdrlraiaaslatagvfpgrclpinareitkqe
lqmvhtsehvdavdttsqllysyftsdtyaneysaraarlaaglcadlatdiftgrvkng
falvrppghhagvrhamgfclhnnaavaalvaqaagakkvlivdwdvhhgngtqeifeqn
ksvlyislhrheggnfypgtgaadevgsnggegycvnvpwscggvgdkdyifafqhvvlp
iasafspdfviisagfdaargdplgccdvtpagysrmtqmlgdlcggkmlvileggynlr
sisasatavikvllgelpiattpsvaglqtvldvlniqlefwpslaisyskll

SCOPe Domain Coordinates for d6j6ta_:

Click to download the PDB-style file with coordinates for d6j6ta_.
(The format of our PDB-style files is described here.)

Timeline for d6j6ta_: