SCOPe 2.08: Domain d6j6tc_: 6j6t C:

Lineage for d6j6tc_ (6j6t C:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.42: Arginase/deacetylase [52767] (1 superfamily)
   3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456

4. Superfamily c.42.1: Arginase/deacetylase [52768] (3 families)

5. Family c.42.1.0: automated matches [191435] (1 protein)
   not a true family

6. Protein automated matches [190626] (14 species)
   not a true protein

7. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [379190] (1 PDB entry)

8. Domain d6j6tc_: 6j6t C: [379191]
   automated match to d5g0ha_
   complexed with k, so4, zn

Details for d6j6tc_

PDB Entry: 6j6t, 2.36 Å

PDB Description: crystal structure of hda15 hd domain

PDB Compounds: (C:) Histone deacetylase 15

SCOPe Domain Sequences for d6j6tc_:

Sequence, based on SEQRES records:

>d6j6tc_ c.42.1.0 (C:) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
tavgfdermllhsefevkaqphperpdrlraiaaslatagvfpgrclpinareitkqelq
mvhtsehvdavdttsqllysyftsdtyaneysaraarlaaglcadlatdiftgrvkngfa
lvrppghhagvrhamgfclhnnaavaalvaqaagakkvlivdwdvhhgngtqeifeqnks
vlyislhrheggnfypgtgaadevgsnggegycvnvpwscggvgdkdyifafqhvvlpia
safspdfviisagfdaargdplgccdvtpagysrmtqmlgdlcggkmlvileggynlrsi
sasatavikvllgenpenelpiattpsvaglqtvldvlniqlefwpslaisyskll

Sequence, based on observed residues (ATOM records):

>d6j6tc_ c.42.1.0 (C:) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
tavgfdermllhsefevkaqphperpdrlraiaaslatagvfpgrclpinareitkqelq
mvhtsehvdavdttsqllysyftsdtyaneysaraarlaaglcadlatdiftgrvkngfa
lvrppghhagvrhamgfclhnnaavaalvaqaagakkvlivdwdvhhgngtqeifeqnks
vlyislhrheggnfypgtgaadevgsnggegycvnvpwscggvgdkdyifafqhvvlpia
safspdfviisagfdaargdplgccdvtpagysrmtqmlgdlcggkmlvileggynlrsi
sasatavikvllgesvaglqtvldvlniqlefwpslaisyskll

Timeline for d6j6tc_:

• d6j6tc_ first appeared in SCOPe 2.07