Lineage for d6om1g1 (6om1 G:1-439)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2808719Fold b.69: 7-bladed beta-propeller [50964] (15 superfamilies)
    consists of seven 4-stranded beta-sheet motifs; meander
  4. 2809519Superfamily b.69.8: Integrin alpha N-terminal domain [69318] (2 families) (S)
  5. 2809520Family b.69.8.1: Integrin alpha N-terminal domain [69319] (2 proteins)
  6. 2809563Protein automated matches [254690] (1 species)
    not a true protein
  7. 2809564Species Human (Homo sapiens) [TaxId:9606] [255892] (14 PDB entries)
  8. 2809571Domain d6om1g1: 6om1 G:1-439 [378043]
    Other proteins in same PDB: d6om1a2, d6om1a3, d6om1c2, d6om1c3, d6om1e2, d6om1e3, d6om1g2, d6om1g3
    automated match to d1m1xa4
    complexed with ca, edo, mes, mg, nag

Details for d6om1g1

PDB Entry: 6om1 (more details), 2.66 Å

PDB Description: crystal structure of an atypical integrin
PDB Compounds: (G:) Integrin alpha-V

SCOPe Domain Sequences for d6om1g1:

Sequence, based on SEQRES records: (download)

>d6om1g1 b.69.8.1 (G:1-439) automated matches {Human (Homo sapiens) [TaxId: 9606]}
fnldvdspaeysgpegsyfgfavdffvpsassrmfllvgapkanttqpgiveggqvlkcd
wsstrrcqpiefdatgnrdyakddplefkshqwfgasvrskqdkilacaplyhwrtemkq
erepvgtcflqdgtktveyapcrsqdidadgqgfcqggfsidftkadrvllggpgsfywq
gqlisdqvaeivskydpnvysikynnqlatrtaqaifddsylgysvavgdfngdgiddfv
sgvpraartlgmvyiydgknmsslynftgeqmaayfgfsvaatdingddyadvfigaplf
mdrgsdgklqevgqvsvslqrasgdfqttklngfevfarfgsaiaplgdldqdgfndiai
aapyggedkkgivyifngrstglnavpsqilegqwaarsgcppsfgysmkgatdidkngy
pdlivgafgvdrailyrar

Sequence, based on observed residues (ATOM records): (download)

>d6om1g1 b.69.8.1 (G:1-439) automated matches {Human (Homo sapiens) [TaxId: 9606]}
fnldvdspaeysgpegsyfgfavdffvpsssrmfllvgapkanttqpgiveggqvlkcdw
sstrrcqpiefdatgnrdyakddplefkshqwfgasvrskqdkilacaplyhwrtemkqe
repvgtcflqdgtktveyapcrsqdidadgqgfcqggfsidftkadrvllggpgsfywqg
qlisdqvaeivskydpnvysikynnqlatrtaqaifddsylgysvavgdfngdgiddfvs
gvpraartlgmvyiydgknmsslynftgeqmaayfgfsvaatdingddyadvfigaplfm
drgsdgklqevgqvsvslqrasgdfqttklngfevfarfgsaiaplgdldqdgfndiaia
apyggedkkgivyifngrstglnavpsqilegqwaarsgcppsfgysmkgatdidkngyp
dlivgafgvdrailyrar

SCOPe Domain Coordinates for d6om1g1:

Click to download the PDB-style file with coordinates for d6om1g1.
(The format of our PDB-style files is described here.)

Timeline for d6om1g1: