Lineage for d6uoca_ (6uoc A:)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2481831Fold c.42: Arginase/deacetylase [52767] (1 superfamily)
    3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456
  4. 2481832Superfamily c.42.1: Arginase/deacetylase [52768] (3 families) (S)
  5. 2482296Family c.42.1.0: automated matches [191435] (1 protein)
    not a true family
  6. 2482297Protein automated matches [190626] (12 species)
    not a true protein
  7. 2482405Species Zebrafish (Danio rerio) [TaxId:7955] [319911] (53 PDB entries)
  8. 2482419Domain d6uoca_: 6uoc A: [377912]
    automated match to d5g0ga_
    complexed with edo, k, qcm, zn; mutant

Details for d6uoca_

PDB Entry: 6uoc (more details), 1.4 Å

PDB Description: crystal structure of danio rerio histone deacetylase 6 catalytic domain 1 (cd1) k330l mutant complexed with givinostat
PDB Compounds: (A:) Histone deacetylase 6

SCOPe Domain Sequences for d6uoca_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6uoca_ c.42.1.0 (A:) automated matches {Zebrafish (Danio rerio) [TaxId: 7955]}
atgtglvyvdaftrfhclwdashpecparvstvmemletegllgrcvqvearavtedell
lvhtkeyvelmkstqnmteeelktlaekydsvylhpgffssaclsvgsvlqlvdkvmtsq
lrngfsinrppghhaqadkmngfcmfnnlaiaaryaqkrhrvqrvlivdwdvhhgqgiqy
ifeedpsvlyfsvhryedgsfwphlkesdsssvgsgagqgyninlpwnkvgmesgdyita
fqqlllpvayefqpqlvlvaagfdavigdplggmqvspecfsilthmlkgvaqgrlvlal
eggynlqstaegvcasmrsllgdpcphlpssgapcesalksisktisdlypfwkslqt

SCOPe Domain Coordinates for d6uoca_:

Click to download the PDB-style file with coordinates for d6uoca_.
(The format of our PDB-style files is described here.)

Timeline for d6uoca_: