SCOPe 2.08: Domain d6ikta_: 6ikt A:

Lineage for d6ikta_ (6ikt A:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.167: Peptide deformylase [56419] (1 superfamily)
   alpha-beta(5)-alpha; 3 layers: a/b/a; meander beta-sheet wraps around the C-terminal alpha-helix

4. Superfamily d.167.1: Peptide deformylase [56420] (2 families)
   nickel-dependent enzyme

5. Family d.167.1.0: automated matches [191587] (1 protein)
   not a true family

6. Protein automated matches [191055] (20 species)
   not a true protein

7. Species Xanthomonas oryzae [TaxId:64187] [188927] (16 PDB entries)

8. Domain d6ikta_: 6ikt A: [375984]
   automated match to d5cwxa_
   complexed with cd, k1u, ni

Details for d6ikta_

PDB Entry: 6ikt, 1.9 Å

PDB Description: k1u complex structure of peptide deformylase from xanthomonas oryzae pv. oryzae

PDB Compounds: (A:) Peptide deformylase

SCOPe Domain Sequences for d6ikta_:

Sequence, based on SEQRES records:

>d6ikta_ d.167.1.0 (A:) automated matches {Xanthomonas oryzae [TaxId: 64187]}
mirdiirmgdkrllrvapqvtnlgsaelhalvsdmfetmgaahgvglaapqiavdlqlmv
fgfeaserypeapavpltalanaqieplsdemengwegclsipglravipryryiryrgf
apdgspiereaegfharvvqheydhlvgrlypsrienfdtfgfddvlsy

Sequence, based on observed residues (ATOM records):

>d6ikta_ d.167.1.0 (A:) automated matches {Xanthomonas oryzae [TaxId: 64187]}
mirdiirmgdkrllrvapqvtnlgsaelhalvsdmfetmgaahgvglaapqiavdlqlmv
fgfavpltalanaqieplsdemengwegclsipglravipryryiryrgfapdgspiere
aegfharvvqheydhlvgrlypsrienfdtfgfddvlsy

Timeline for d6ikta_:

• d6ikta_ first appeared in SCOPe 2.07