Lineage for d6u06b_ (6u06 B:)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2569268Fold d.86: eIF4e-like [55417] (1 superfamily)
    beta(2)-alpha-beta(2)-alpha-beta(2)-alpha-beta-2; 2 layers: alpha/beta; antiparallel sheet: 21356478
  4. 2569269Superfamily d.86.1: eIF4e-like [55418] (3 families) (S)
  5. 2569270Family d.86.1.1: Translation initiation factor eIF4e [55419] (1 protein)
    automatically mapped to Pfam PF01652
  6. 2569271Protein Translation initiation factor eIF4e [55420] (3 species)
    messenger RNA 5' cap-binding protein
  7. 2569303Species Mouse (Mus musculus) [TaxId:10090] [55421] (24 PDB entries)
  8. 2569350Domain d6u06b_: 6u06 B: [375909]
    automated match to d1l8bb_
    complexed with ei8

Details for d6u06b_

PDB Entry: 6u06 (more details), 1.96 Å

PDB Description: discovery of lysine-targeted eif4e inhibitors through covalent docking
PDB Compounds: (B:) eukaryotic translation initiation factor 4e

SCOPe Domain Sequences for d6u06b_:

Sequence, based on SEQRES records: (download)

>d6u06b_ d.86.1.1 (B:) Translation initiation factor eIF4e {Mouse (Mus musculus) [TaxId: 10090]}
npehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmpgc
dyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddv
cgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatksgs
ttknrfvv

Sequence, based on observed residues (ATOM records): (download)

>d6u06b_ d.86.1.1 (B:) Translation initiation factor eIF4e {Mouse (Mus musculus) [TaxId: 10090]}
npehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmpgc
dyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddv
cgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatknrf
vv

SCOPe Domain Coordinates for d6u06b_:

Click to download the PDB-style file with coordinates for d6u06b_.
(The format of our PDB-style files is described here.)

Timeline for d6u06b_: