SCOPe 2.08: Domain d6jiod1: 6jio D:221-459

Lineage for d6jiod1 (6jio D:221-459)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Oxysterols receptor LXR-beta [89149] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [89150] (21 PDB entries)
   Uniprot P55055 219-461

8. Domain d6jiod1: 6jio D:221-459 [375442]
   Other proteins in same PDB: d6jioa2, d6jiob2, d6jioc2, d6jiod2
   automated match to d5i4va_
   protein/DNA complex; complexed with bq3

Details for d6jiod1

PDB Entry: 6jio, 2.6 Å

PDB Description: human lxr-beta in complex with a ligand

PDB Compounds: (D:) oxysterols receptor lxr-beta

SCOPe Domain Sequences for d6jiod1:

Sequence, based on SEQRES records:

>d6jiod1 a.123.1.1 (D:221-459) Oxysterols receptor LXR-beta {Human (Homo sapiens) [TaxId: 9606]}
taaqelmiqqlvaaqlqcnkrsfsdqpkvtpwplgadpasgsasqqrfahftelaiisvq
eivdfakqvpgflqlgredqiallkastieimlletarrynhetecitflkdftyskddf
hraglqvefinpifefsramrrlglddaeyalliainifsadrpnvqepgrvealqqpyv
eallsytrikrpqdqlrfprmlmklvslrtlssvhseqvfalrlqdkklppllseiwdv

Sequence, based on observed residues (ATOM records):

>d6jiod1 a.123.1.1 (D:221-459) Oxysterols receptor LXR-beta {Human (Homo sapiens) [TaxId: 9606]}
taaqelmiqqlvaaqlqcnkrsfsdqpkvtpwpadpasgsasqqrfahftelaiisvqei
vdfakqvpgflqlgredqiallkastieimlletarrynhetecitflkdftyskddfhr
aglqvefinpifefsramrrlglddaeyalliainifsadrpnvqepgrvealqqpyvea
llsytrikrpqdqlrfprmlmklvslrtlssvhseqvfalrlqdkklppllseiwdv

Timeline for d6jiod1:

• d6jiod1 first appeared in SCOPe 2.07