SCOPe 2.08: Domain d1pmda1: 1pmd A:631-692

Lineage for d1pmda1 (1pmd A:631-692)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.11: Penicillin-binding protein 2x (pbp-2x), c-terminal domain [54183] (1 superfamily)
   alpha1-beta3; 2 layers: alpha/beta; order 132

4. Superfamily d.11.1: Penicillin-binding protein 2x (pbp-2x), c-terminal domain [54184] (2 families)
   duplication: consists of 2 subdomains of this fold

5. Family d.11.1.1: Penicillin-binding protein 2x (pbp-2x), c-terminal domain [54185] (1 protein)

6. Protein Penicillin-binding protein 2x (pbp-2x), c-terminal domain [54186] (1 species)

7. Species Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [54187] (10 PDB entries)

8. Domain d1pmda1: 1pmd A:631-692 [37491]
   Other proteins in same PDB: d1pmda3, d1pmda4
   CA-atoms only

Details for d1pmda1

PDB Entry: 1pmd, 3.5 Å

PDB Description: penicillin-binding protein 2x (pbp-2x)

PDB Compounds: (A:) peptidoglycan synthesis multifunctional enzyme

SCOPe Domain Sequences for d1pmda1:

Sequence; same for both SEQRES and ATOM records:

>d1pmda1 d.11.1.1 (A:631-692) Penicillin-binding protein 2x (pbp-2x), c-terminal domain {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
sqqspypmpsvkdispgdlaeelrrnlvqpivvgtgtkiknssaeegknlapnqqvlils
dk

Timeline for d1pmda1:

• d1pmda1 first appeared (with stable ids) in SCOP 1.55, called d1pmd_1
  
• d1pmda1 appears in SCOPe 2.07