SCOPe 2.08: Domain d6pu0a2: 6pu0 A:206-497

Lineage for d6pu0a2 (6pu0 A:206-497)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.99: Cryptochrome/photolyase FAD-binding domain [48172] (1 superfamily)
   multihelical; consists of two all-alpha subdomains

4. Superfamily a.99.1: Cryptochrome/photolyase FAD-binding domain [48173] (2 families)
   automatically mapped to Pfam PF03441

5. Family a.99.1.0: automated matches [231382] (1 protein)
   not a true family

6. Protein automated matches [231383] (3 species)
   not a true protein

7. Species Domestic pigeon (Columba livia) [TaxId:8932] [373723] (2 PDB entries)

8. Domain d6pu0a2: 6pu0 A:206-497 [373724]
   Other proteins in same PDB: d6pu0a1
   automated match to d4i6ga2
   complexed with edo, fad, gol, peg, pge

Details for d6pu0a2

PDB Entry: 6pu0, 1.9 Å

PDB Description: pigeon cryptochrome4 bound to flavin adenine dinucleotide

PDB Compounds: (A:) Cryptochrome-1

SCOPe Domain Sequences for d6pu0a2:

Sequence, based on SEQRES records:

>d6pu0a2 a.99.1.0 (A:206-497) automated matches {Domestic pigeon (Columba livia) [TaxId: 8932]}
spwtggeteglrrleqhltdqgwvanftkprtipnsllpsttglspyfsmgclsvrtffq
rlsniyaqakhhslppvslqgqllwreffytvasatqnftqmagnpiclqihwyedaerl
hkwktaqtgfpwidaimtqlrqegwihhlarhavacfltrgdlwisweegmkvfeellld
adysinagnwmwlsasaffhhytrifcpvrfgkrtdpegqyirkylpvlknfptkyiyep
wtaseeeqrqagciigrdypfpmvnhkeasdrnlqlmrrvreeqrgtaqltr

Sequence, based on observed residues (ATOM records):

>d6pu0a2 a.99.1.0 (A:206-497) automated matches {Domestic pigeon (Columba livia) [TaxId: 8932]}
spwtggeteglrrleqhltdqgsttglspyfsmgclsvrtffqrlsniyaqakhhslppv
slqgqllwreffytvasatqnftqmagnpiclqihwyedaerlhkwktaqtgfpwidaim
tqlrqegwihhlarhavacfltrgdlwisweegmkvfeellldadysinagnwmwlsasa
ffhhytrifcpvrfgkrtdpegqyirkylpvlknfptkyiyepwtaseeeqrqagciigr
dypfpmvnhkeasdrnlqlmrrvreeqrgtaqltr

Timeline for d6pu0a2:

• d6pu0a2 first appeared in SCOPe 2.07