Lineage for d6hmyd_ (6hmy D:)

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.40: OB-fold [50198] (17 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. Superfamily b.40.2: Bacterial enterotoxins [50203] (3 families) (S)
  5. Family b.40.2.1: Bacterial AB5 toxins, B-subunits [50204] (7 proteins)
  6. Protein Cholera toxin [50208] (2 species)
    barrel, partly opened; n*=5, S*=10
  7. Species Vibrio cholerae [TaxId:666] [50209] (29 PDB entries)
    Uniprot P01556 22-124
  8. Domain d6hmyd_: 6hmy D: [372865]
    automated match to d1jr0d_
    complexed with bcn, ca, fuc

Details for d6hmyd_

PDB Entry: 6hmy (more details), 1.6 Å

PDB Description: cholera toxin classical b-pentamer in complex with fucosyl-gm1
PDB Compounds: (D:) cholera enterotoxin B-subunit

SCOPe Domain Sequences for d6hmyd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6hmyd_ b.40.2.1 (D:) Cholera toxin {Vibrio cholerae [TaxId: 666]}
tpqnitdlcaeyhntqihtlndkifsyteslagkremaiitfkngatfqvevpgsqhids
qkkaiermkdtlriaylteakveklcvwnnktphaiaaisman

SCOPe Domain Coordinates for d6hmyd_ are not available.

Timeline for d6hmyd_:

Domains from other chains:
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d6hmya_, d6hmyb_, d6hmyc_, d6hmye_, d6hmyf_, d6hmyg_, d6hmyh_, d6hmyi_, d6hmyj_