Lineage for d6p4ja_ (6p4j A:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2821778Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2822534Family b.121.4.0: automated matches [191569] (1 protein)
    not a true family
  6. 2822535Protein automated matches [190988] (51 species)
    not a true protein
  7. 2822692Species Murine norovirus 1 [TaxId:223997] [372678] (13 PDB entries)
  8. 2822721Domain d6p4ja_: 6p4j A: [372733]
    automated match to d1ihmb_
    complexed with cho

Details for d6p4ja_

PDB Entry: 6p4j (more details), 3.1 Å

PDB Description: mouse norovirus complexed with gcdca
PDB Compounds: (A:) capsid protein

SCOPe Domain Sequences for d6p4ja_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6p4ja_ b.121.4.0 (A:) automated matches {Murine norovirus 1 [TaxId: 223997]}
qdlvpaaveqavpiqpvagaalaapaagqinqidpwifqnfvqcplgefsisprntpgei
lfdlalgpglnpylahlsamytgwvgnmevqlvlagnaftagkvvvalvppyfpkgsltt
aqitcfphvmcdvrtlepiqlplldvrrvlwhatqdqeesmrlvcmlytplrtnspgdes
fvvsgrllskpaadfnfvyltppiertiyrmvdlpviqprlctharwpapvygllvdpsl
psnpqwqngrvhvdgtllgttpisgswvscfaaeaayefqsgtgevatftlieqdgsayv
pgdraaplgypdfsgqleievqtettktgdklkvttfemilgpttnadqapyqgrvfasv
taaasldlvdgrvravprsiygfqdtipeyndgllvplappigpflpgevllrfrtymrq
idtadaaaeaidcalpqefvswfasnaftvqsealllryrntltgqllfecklynegyia
lsysgsgpltfptdgifevvswvprlyqlasvgs

SCOPe Domain Coordinates for d6p4ja_:

Click to download the PDB-style file with coordinates for d6p4ja_.
(The format of our PDB-style files is described here.)

Timeline for d6p4ja_: