Lineage for d6p4lc_ (6p4l C:)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2430785Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2431062Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2431815Family b.121.4.0: automated matches [191569] (1 protein)
    not a true family
  6. 2431816Protein automated matches [190988] (22 species)
    not a true protein
  7. 2431942Species Murine norovirus 1 [TaxId:223997] [372678] (4 PDB entries)
  8. 2431948Domain d6p4lc_: 6p4l C: [372685]
    automated match to d1ihmb_

Details for d6p4lc_

PDB Entry: 6p4l (more details), 3.1 Å

PDB Description: bile salts alter the mouse norovirus capsid conformation; possible implications for cell attachment and immune evasion.
PDB Compounds: (C:) capsid protein

SCOPe Domain Sequences for d6p4lc_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6p4lc_ b.121.4.0 (C:) automated matches {Murine norovirus 1 [TaxId: 223997]}
avpiqpvagaalaapaagqinqidpwifqnfvqcplgefsisprntpgeilfdlalgpgl
npylahlsamytgwvgnmevqlvlagnaftagkvvvalvppyfpkgslttaqitcfphvm
cdvrtlepiqlplldvrrvlwhatqdqeesmrlvcmlytplrtnspgdesfvvsgrllsk
paadfnfvyltpp

SCOPe Domain Coordinates for d6p4lc_:

Click to download the PDB-style file with coordinates for d6p4lc_.
(The format of our PDB-style files is described here.)

Timeline for d6p4lc_: