Lineage for Species: Murine norovirus 1 [TaxId: 223997]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2821778Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2822534Family b.121.4.0: automated matches [191569] (1 protein)
    not a true family
  6. 2822535Protein automated matches [190988] (51 species)
    not a true protein
  7. 2822692Species Murine norovirus 1 [TaxId:223997] [372678] (13 PDB entries)

PDB entries in Species: Murine norovirus 1 [TaxId: 223997]:

  1. Domain(s) for 3lq6:
    1. 2822693Domain d3lq6a_: 3lq6 A: [413311]
      automated match to d5or7a_
    2. 2822694Domain d3lq6b_: 3lq6 B: [413312]
      automated match to d5or7a_
  2. Domain(s) for 6c6q:
    1. 2822703Domain d6c6qa_: 6c6q A: [410920]
      Other proteins in same PDB: d6c6qd_, d6c6qf_
      automated match to d5or7a_
      complexed with cl, edo, mg
    2. 2822704Domain d6c6qb_: 6c6q B: [410921]
      Other proteins in same PDB: d6c6qd_, d6c6qf_
      automated match to d5or7a_
      complexed with cl, edo, mg
  3. Domain(s) for 6e47:
    1. 2822699Domain d6e47a_: 6e47 A: [411030]
      Other proteins in same PDB: d6e47f_, d6e47g_
      automated match to d5or7a_
      complexed with cho, edo, mg
    2. 2822700Domain d6e47b_: 6e47 B: [411031]
      Other proteins in same PDB: d6e47f_, d6e47g_
      automated match to d5or7a_
      complexed with cho, edo, mg
  4. Domain(s) for 6e48:
    1. 2822697Domain d6e48a_: 6e48 A: [411032]
      Other proteins in same PDB: d6e48f_, d6e48g_
      automated match to d5or7a_
      complexed with 4oa, ca, edo
    2. 2822698Domain d6e48b_: 6e48 B: [411033]
      Other proteins in same PDB: d6e48f_, d6e48g_
      automated match to d5or7a_
      complexed with 4oa, ca, edo
  5. Domain(s) for 6h6l:
    1. 2822711Domain d6h6la_: 6h6l A: [411195]
      Other proteins in same PDB: d6h6le_, d6h6lf_, d6h6lg_, d6h6lh_
      automated match to d5or7a_
      complexed with cho, edo, mg, na
    2. 2822712Domain d6h6lb_: 6h6l B: [411196]
      Other proteins in same PDB: d6h6le_, d6h6lf_, d6h6lg_, d6h6lh_
      automated match to d5or7a_
      complexed with cho, edo, mg, na
    3. 2822713Domain d6h6lc_: 6h6l C: [411197]
      Other proteins in same PDB: d6h6le_, d6h6lf_, d6h6lg_, d6h6lh_
      automated match to d5or7a_
      complexed with cho, edo, mg, na
    4. 2822714Domain d6h6ld_: 6h6l D: [411198]
      Other proteins in same PDB: d6h6le_, d6h6lf_, d6h6lg_, d6h6lh_
      automated match to d5or7a_
      complexed with cho, edo, mg, na
  6. Domain(s) for 6p4j:
    1. 2822721Domain d6p4ja_: 6p4j A: [372733]
      automated match to d1ihmb_
      complexed with cho
    2. 2822722Domain d6p4jb_: 6p4j B: [372679]
      automated match to d1ihmb_
      complexed with cho
    3. 2822723Domain d6p4jc_: 6p4j C: [372763]
      automated match to d1ihmb_
      complexed with cho
  7. Domain(s) for 6p4k:
    1. 2822724Domain d6p4ka_: 6p4k A: [372702]
      automated match to d1ihmb_
      complexed with tch
    2. 2822725Domain d6p4kb_: 6p4k B: [372745]
      automated match to d1ihmb_
      complexed with tch
    3. 2822726Domain d6p4kc_: 6p4k C: [372681]
      automated match to d1ihmb_
      complexed with tch
  8. Domain(s) for 6p4l:
    1. 2822718Domain d6p4la_: 6p4l A: [372686]
      automated match to d1ihmb_
    2. 2822719Domain d6p4lb_: 6p4l B: [372709]
      automated match to d1ihmb_
    3. 2822720Domain d6p4lc_: 6p4l C: [372685]
      automated match to d1ihmb_
  9. Domain(s) for 6s6l:
    1. 2822715Domain d6s6la_: 6s6l A: [385523]
      automated match to d1ihmb_
    2. 2822716Domain d6s6lb_: 6s6l B: [385542]
      automated match to d1ihmb_
    3. 2822717Domain d6s6lc_: 6s6l C: [385536]
      automated match to d1ihmb_
  10. Domain(s) for 6xw4:
    1. 2822709Domain d6xw4a_: 6xw4 A: [412193]
      Other proteins in same PDB: d6xw4c1, d6xw4c2, d6xw4c3, d6xw4d1, d6xw4d2, d6xw4d3
      automated match to d5or7a_
      complexed with edo
    2. 2822710Domain d6xw4b_: 6xw4 B: [412194]
      Other proteins in same PDB: d6xw4c1, d6xw4c2, d6xw4c3, d6xw4d1, d6xw4d2, d6xw4d3
      automated match to d5or7a_
      complexed with edo
  11. Domain(s) for 6xw5:
    1. 2822695Domain d6xw5a_: 6xw5 A: [412195]
      Other proteins in same PDB: d6xw5c1, d6xw5c2, d6xw5c3, d6xw5d1, d6xw5d2, d6xw5d3
      automated match to d5or7a_
      complexed with edo, trs
    2. 2822696Domain d6xw5b_: 6xw5 B: [412196]
      Other proteins in same PDB: d6xw5c1, d6xw5c2, d6xw5c3, d6xw5d1, d6xw5d2, d6xw5d3
      automated match to d5or7a_
      complexed with edo, trs
  12. Domain(s) for 6xw6:
    1. 2822701Domain d6xw6a1: 6xw6 A:228-530 [412197]
      Other proteins in same PDB: d6xw6a2, d6xw6b2, d6xw6c1, d6xw6c2, d6xw6c3, d6xw6d1, d6xw6d2, d6xw6d3
      automated match to d5or7a_
      complexed with edo, mg
    2. 2822702Domain d6xw6b1: 6xw6 B:228-530 [412199]
      Other proteins in same PDB: d6xw6a2, d6xw6b2, d6xw6c1, d6xw6c2, d6xw6c3, d6xw6d1, d6xw6d2, d6xw6d3
      automated match to d5or7a_
      complexed with edo, mg
  13. Domain(s) for 6xw7:
    1. 2822705Domain d6xw7a1: 6xw7 A:226-530 [412201]
      Other proteins in same PDB: d6xw7a2, d6xw7c1, d6xw7c2, d6xw7c3, d6xw7d1, d6xw7d2, d6xw7d3, d6xw7g1, d6xw7g2, d6xw7g3, d6xw7h1, d6xw7h2
      automated match to d5or7a_
      complexed with cho, edo, mg
    2. 2822706Domain d6xw7b_: 6xw7 B: [412203]
      Other proteins in same PDB: d6xw7a2, d6xw7c1, d6xw7c2, d6xw7c3, d6xw7d1, d6xw7d2, d6xw7d3, d6xw7g1, d6xw7g2, d6xw7g3, d6xw7h1, d6xw7h2
      automated match to d5or7a_
      complexed with cho, edo, mg
    3. 2822707Domain d6xw7e_: 6xw7 E: [412204]
      Other proteins in same PDB: d6xw7a2, d6xw7c1, d6xw7c2, d6xw7c3, d6xw7d1, d6xw7d2, d6xw7d3, d6xw7g1, d6xw7g2, d6xw7g3, d6xw7h1, d6xw7h2
      automated match to d5or7a_
      complexed with cho, edo, mg
    4. 2822708Domain d6xw7f_: 6xw7 F: [412205]
      Other proteins in same PDB: d6xw7a2, d6xw7c1, d6xw7c2, d6xw7c3, d6xw7d1, d6xw7d2, d6xw7d3, d6xw7g1, d6xw7g2, d6xw7g3, d6xw7h1, d6xw7h2
      automated match to d5or7a_
      complexed with cho, edo, mg

More info for Species Murine norovirus 1 [TaxId:223997] from b.121.4.0 automated matches

Timeline for Species Murine norovirus 1 [TaxId:223997] from b.121.4.0 automated matches: