SCOPe 2.08: Species: Enterobacteria phage [TaxId: 261665]

Lineage for Species: Enterobacteria phage [TaxId: 261665]

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)

Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

Superfamily b.121.2: Group II dsDNA viruses VP [49749] (4 families)

duplication: consists of two domains of this fold packed together like the nucleoplasmin subunits
trimeric; in the trimers, the domains are arranged around pseudo six-fold axis

Family b.121.2.1: Coat protein p3 [49750] (3 proteins)
Protein automated matches [371282] (1 species)
not a true protein
Species Enterobacteria phage [TaxId:261665] [371283] (1 PDB entry)

PDB entry in Species: Enterobacteria phage [TaxId: 261665]:

Domain(s) for 6q5u:
1. Domain d6q5ua1: 6q5u A:3-244 [371553]
  Other proteins in same PDB: d6q5ua2, d6q5ub2, d6q5uc2, d6q5ud2, d6q5ue2, d6q5uf2, d6q5ug2, d6q5uh2, d6q5ui2, d6q5uj2, d6q5uk2, d6q5ul2
  automated match to d1cjdb1
2. Domain d6q5ub1: 6q5u B:14-244 [371284]
  Other proteins in same PDB: d6q5ua2, d6q5ub2, d6q5uc2, d6q5ud2, d6q5ue2, d6q5uf2, d6q5ug2, d6q5uh2, d6q5ui2, d6q5uj2, d6q5uk2, d6q5ul2
  automated match to d1cjdb1
3. Domain d6q5uc1: 6q5u C:2-244 [371294]
  Other proteins in same PDB: d6q5ua2, d6q5ub2, d6q5uc2, d6q5ud2, d6q5ue2, d6q5uf2, d6q5ug2, d6q5uh2, d6q5ui2, d6q5uj2, d6q5uk2, d6q5ul2
  automated match to d1cjdb1
4. Domain d6q5ud1: 6q5u D:12-244 [371289]
  Other proteins in same PDB: d6q5ua2, d6q5ub2, d6q5uc2, d6q5ud2, d6q5ue2, d6q5uf2, d6q5ug2, d6q5uh2, d6q5ui2, d6q5uj2, d6q5uk2, d6q5ul2
  automated match to d1cjdb1
5. Domain d6q5ue1: 6q5u E:12-244 [371512]
  Other proteins in same PDB: d6q5ua2, d6q5ub2, d6q5uc2, d6q5ud2, d6q5ue2, d6q5uf2, d6q5ug2, d6q5uh2, d6q5ui2, d6q5uj2, d6q5uk2, d6q5ul2
  automated match to d1cjdb1
6. Domain d6q5uf1: 6q5u F:2-244 [371535]
  Other proteins in same PDB: d6q5ua2, d6q5ub2, d6q5uc2, d6q5ud2, d6q5ue2, d6q5uf2, d6q5ug2, d6q5uh2, d6q5ui2, d6q5uj2, d6q5uk2, d6q5ul2
  automated match to d1cjdb1
7. Domain d6q5ug1: 6q5u G:6-244 [371303]
  Other proteins in same PDB: d6q5ua2, d6q5ub2, d6q5uc2, d6q5ud2, d6q5ue2, d6q5uf2, d6q5ug2, d6q5uh2, d6q5ui2, d6q5uj2, d6q5uk2, d6q5ul2
  automated match to d1cjdb1
8. Domain d6q5uh1: 6q5u H:11-244 [371434]
  Other proteins in same PDB: d6q5ua2, d6q5ub2, d6q5uc2, d6q5ud2, d6q5ue2, d6q5uf2, d6q5ug2, d6q5uh2, d6q5ui2, d6q5uj2, d6q5uk2, d6q5ul2
  automated match to d1cjdb1
9. Domain d6q5ui1: 6q5u I:2-244 [371403]
  Other proteins in same PDB: d6q5ua2, d6q5ub2, d6q5uc2, d6q5ud2, d6q5ue2, d6q5uf2, d6q5ug2, d6q5uh2, d6q5ui2, d6q5uj2, d6q5uk2, d6q5ul2
  automated match to d1cjdb1
10. Domain d6q5uj1: 6q5u J:3-244 [371516]
  Other proteins in same PDB: d6q5ua2, d6q5ub2, d6q5uc2, d6q5ud2, d6q5ue2, d6q5uf2, d6q5ug2, d6q5uh2, d6q5ui2, d6q5uj2, d6q5uk2, d6q5ul2
  automated match to d1cjdb1
11. Domain d6q5uk1: 6q5u K:14-244 [371401]
  Other proteins in same PDB: d6q5ua2, d6q5ub2, d6q5uc2, d6q5ud2, d6q5ue2, d6q5uf2, d6q5ug2, d6q5uh2, d6q5ui2, d6q5uj2, d6q5uk2, d6q5ul2
  automated match to d1cjdb1
12. Domain d6q5ul1: 6q5u L:4-244 [371297]
  Other proteins in same PDB: d6q5ua2, d6q5ub2, d6q5uc2, d6q5ud2, d6q5ue2, d6q5uf2, d6q5ug2, d6q5uh2, d6q5ui2, d6q5uj2, d6q5uk2, d6q5ul2
  automated match to d1cjdb1

More info for Species Enterobacteria phage [TaxId:261665] from b.121.2.1 automated matches

Timeline for Species Enterobacteria phage [TaxId:261665] from b.121.2.1 automated matches:

Species Enterobacteria phage [TaxId:261665] from b.121.2.1 automated matches first appeared in SCOPe 2.07