Lineage for d1df0a3 (1df0 A:2-355)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2154577Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2154578Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2155026Family d.3.1.3: Calpain large subunit, catalytic domain (domain II) [54040] (1 protein)
    automatically mapped to Pfam PF00648
  6. 2155027Protein Calpain large subunit, catalytic domain (domain II) [54041] (6 species)
    includes the N-terminal 'sequence' domain I
  7. 2155040Species Norway rat (Rattus norvegicus), M-type [TaxId:10116] [54043] (3 PDB entries)
  8. 2155043Domain d1df0a3: 1df0 A:2-355 [37106]
    Other proteins in same PDB: d1df0a1, d1df0a2, d1df0b_

Details for d1df0a3

PDB Entry: 1df0 (more details), 2.6 Å

PDB Description: Crystal structure of M-Calpain
PDB Compounds: (A:) m-calpain

SCOPe Domain Sequences for d1df0a3:

Sequence, based on SEQRES records: (download)

>d1df0a3 d.3.1.3 (A:2-355) Calpain large subunit, catalytic domain (domain II) {Norway rat (Rattus norvegicus), M-type [TaxId: 10116]}
agiamklakdreaaeglgsheraikylnqdyetlrnecleagalfqdpsfpalpsslgfk
elgpyssktrgiewkrpteicadpqfiiggatrtdicqgalgdswllaaiasltlneeil
arvvpldqsfqenyagifhfqfwqygewvevvvddrlptkdgellfvhsaegsefwsall
ekayakingcyealsggattegfedftggiaewyelrkpppnlfkiiqkalekgsllgcs
iditsaadseavtyqklvkghaysvtgaeevessgslqklirirnpwgqvewtgkwndnc
pswntvdpevranlterqedgefwmsfsdflrhysrleicnltpdtltcdsykk

Sequence, based on observed residues (ATOM records): (download)

>d1df0a3 d.3.1.3 (A:2-355) Calpain large subunit, catalytic domain (domain II) {Norway rat (Rattus norvegicus), M-type [TaxId: 10116]}
agiamklakdreaaeglgsheraikylnqdyetlrnecleagalfqdpsfpalpsslgfk
elgpyssktrgiewkrpteicadpqfiiggatrtdicqgalgdswllaaiasltlneeil
arvvpldqsfqenyagifhfqfwqygewvevvvddrlptkdgellfvhsaegsefwsall
ekayakingcyealsggattegfedftggiaewyelrkpppnlfkiiqkalekgsllgcs
idighaysvtgaeevqklirirnpwgqgefwmsfsdflrhysrleicnltpdtltcdsyk
k

SCOPe Domain Coordinates for d1df0a3:

Click to download the PDB-style file with coordinates for d1df0a3.
(The format of our PDB-style files is described here.)

Timeline for d1df0a3:

View in 3D
Domains from other chains:
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d1df0b_