SCOPe 2.08: Domain d6o63a_: 6o63 A:

Lineage for d6o63a_ (6o63 A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (61 families)

5. Family c.66.1.17: Spermidine synthase [69557] (3 proteins)
   contains additional N-terminal tetramerisation all-beta domain, res. 1-71

6. Protein Spermidine synthase [69558] (6 species)
   polyamine aminopropyltransferase

7. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [117680] (4 PDB entries)
   Uniprot Q9ZUB3

8. Domain d6o63a_: 6o63 A: [371049]
   automated match to d1xj5b_
   complexed with gol, peg, so4

Details for d6o63a_

PDB Entry: 6o63, 1.8 Å

PDB Description: crystal structure of arabidopsis thaliana spermidine synthase isoform 1 (atspds1)

PDB Compounds: (A:) Spermidine synthase 1

SCOPe Domain Sequences for d6o63a_:

Sequence, based on SEQRES records:

>d6o63a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
pacfstvipgwfsemspmwpgeahslkvekvlfqgksdyqdvivfqsatygkvlvldgvi
qlterdecayqemithlplcsipnpkkvlvigggdggvlrevarhasieqidmceidkmv
vdvskqffpdvaigyedprvnlvigdgvaflknaaegsydavivdssdpigpakelfekp
ffqsvaralrpggvvctqaeslwlhmdiiedivsncreifkgsvnyawtsvptypsgvig
fmlcstegpdvdfkhplnpidesssksngplkfynaeihsaafclpsfakkvie

Sequence, based on observed residues (ATOM records):

>d6o63a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
pacfstvipgwfsemspmwpgeahslkvekvlfqgksdyqdvivfqsatygkvlvldgvi
qlterdecayqemithlplcsipnpkkvlvigggdggvlrevarhasieqidmceidkmv
vdvskqffpdvaigyedprvnlvigdgvaflknaaegsydavivdssdpigpakelfekp
ffqsvaralrpggvvctqaeslwlhmdiiedivsncreifkgsvnyawtsvptypsgvig
fmlcstegpdvdfkhplnpidessngplkfynaeihsaafclpsfakkvie

Timeline for d6o63a_:

• d6o63a_ first appeared in SCOPe 2.07