Lineage for d6nngf2 (6nng F:77-378)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2978525Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 2978526Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families) (S)
  5. 2978888Family d.142.1.10: Tubulin tyrosine ligase (TTL) C-terminal domain-like [310626] (2 proteins)
    Pfam PF03133; PubMed 22020298
  6. 2978889Protein Tubulin tyrosine ligase (TTL) C-terminal domain [310728] (3 species)
  7. 2978890Species Chicken (Gallus gallus) [TaxId:9031] [311385] (176 PDB entries)
  8. 2979013Domain d6nngf2: 6nng F:77-378 [370783]
    Other proteins in same PDB: d6nnga1, d6nnga2, d6nngb1, d6nngb2, d6nngc1, d6nngc2, d6nngd1, d6nngd2, d6nnge_, d6nngf1, d6nngf3
    automated match to d3tiia2
    complexed with acp, ca, dj9, gdp, gtp, mes, mg

Details for d6nngf2

PDB Entry: 6nng (more details), 2.4 Å

PDB Description: tubulin-rb3_sld-ttl in complex with compound dj95
PDB Compounds: (F:) tubulin tyrosine ligase

SCOPe Domain Sequences for d6nngf2:

Sequence, based on SEQRES records: (download)

>d6nngf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnlktpvapaqngirhlinntrtderevflaayn
rrregregnvwiakssagakgegilisseaselldfideqgqvhviqkylekplllepgh
rkfdirswvlvdhlyniylyregvlrtssepynsanfqdktchltnhciqkeysknygry
eegnemffeefnqylmdalnttlensillqikhiirsclmciepaistkhlhyqsfqlfg
fdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfpladtgqktsqptsifi
kl

Sequence, based on observed residues (ATOM records): (download)

>d6nngf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyprevflaaynrrregregnvwiaksgilissease
lldfideqgqvhviqkylekplllepghrkfdirswvlvdhlyniylyregvlrtssepy
nsanfqdktchltnhciqknygryeegnemffeefnqylmdalnttlensillqikhiir
sclmciepaistkhlhyqsfqlfgfdfmvdeelkvwlievngapacaqklyaelcqgivd
vaissvfplatsifikl

SCOPe Domain Coordinates for d6nngf2:

Click to download the PDB-style file with coordinates for d6nngf2.
(The format of our PDB-style files is described here.)

Timeline for d6nngf2: