Lineage for d1bp4a_ (1bp4 A:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2497139Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2497140Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2497141Family d.3.1.1: Papain-like [54002] (26 protein domains)
  6. 2497433Protein Papain [54005] (1 species)
  7. 2497434Species Papaya (Carica papaya) [TaxId:3649] [54006] (23 PDB entries)
  8. 2497454Domain d1bp4a_: 1bp4 A: [37011]
    complexed with ald

Details for d1bp4a_

PDB Entry: 1bp4 (more details), 2.2 Å

PDB Description: use of papain as a model for the structure-based design of cathepsin k inhibitors. crystal structures of two papain inhibitor complexes demonstrate binding to s'-subsites.
PDB Compounds: (A:) papain

SCOPe Domain Sequences for d1bp4a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1bp4a_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}

SCOPe Domain Coordinates for d1bp4a_:

Click to download the PDB-style file with coordinates for d1bp4a_.
(The format of our PDB-style files is described here.)

Timeline for d1bp4a_: