Lineage for d6ha0b1 (6ha0 B:228-386)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2373039Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2373040Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 2375103Family b.29.1.0: automated matches [191363] (1 protein)
    not a true family
  6. 2375104Protein automated matches [190437] (63 species)
    not a true protein
  7. 2375619Species Rotavirus a [TaxId:28875] [277665] (10 PDB entries)
  8. 3070025Domain d6ha0b1: 6ha0 B:228-386 [370087]
    Other proteins in same PDB: d6ha0a2, d6ha0b2
    automated match to d5jdba_
    complexed with fuc, gal, nag

Details for d6ha0b1

PDB Entry: 6ha0 (more details), 1.85 Å

PDB Description: unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens
PDB Compounds: (B:) Outer capsid protein VP4

SCOPe Domain Sequences for d6ha0b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6ha0b1 b.29.1.0 (B:228-386) automated matches {Rotavirus a [TaxId: 28875]}
ldgpyqpttftppsdywilinsntngvvyestnnsdfwtaviavephvdpvdrqynvfge
nkqfnvrndsdkwkflemfrgssqndfynrrtltsntrlvgilkyggriwtfhgetprat
tdssntanlngisitihsefyiiprsqeskcneyinngl

SCOPe Domain Coordinates for d6ha0b1:

Click to download the PDB-style file with coordinates for d6ha0b1.
(The format of our PDB-style files is described here.)

Timeline for d6ha0b1:

  • d6ha0b1 is new in SCOPe 2.07-stable

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Domains from same chain:
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d6ha0b2