Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.23: Open three-helical up-and-down bundle [47143] (7 superfamilies)
    core: 3 helices; bundle, open
  4. Superfamily a.23.3: Methane monooxygenase hydrolase, gamma subunit [47152] (1 family) (S)
    duplication: consists of two domains of this fold
    automatically mapped to Pfam PF02964
  5. Family a.23.3.1: Methane monooxygenase hydrolase, gamma subunit [47153] (2 proteins)
  6. Protein automated matches [369668] (2 species)
    not a true protein

Species:

  1. Methylosinus sporium [TaxId:428] [369669] (1 PDB entry)
  2. Methylosinus trichosporium [TaxId:595536] [392672] (11 PDB entries)
    1. Domains for 6vk4:
      1. Domain d6vk4c_: 6vk4 C: [392676]
        Other proteins in same PDB: d6vk4a_, d6vk4b_, d6vk4d_, d6vk4e_, d6vk4f_, d6vk4h_
        automated match to d1mhyg_
        complexed with bez, edo, fe, fe2
      2. Domain d6vk4g_: 6vk4 G: [392734]
        Other proteins in same PDB: d6vk4a_, d6vk4b_, d6vk4d_, d6vk4e_, d6vk4f_, d6vk4h_
        automated match to d1mhyg_
        complexed with bez, edo, fe, fe2
    2. Domains for 6vk5:
      1. Domain d6vk5c_: 6vk5 C: [392806]
        Other proteins in same PDB: d6vk5a_, d6vk5b_, d6vk5d_, d6vk5e_, d6vk5f_, d6vk5h_
        automated match to d1mhyg_
        complexed with bez, cl, edo, fe
      2. Domain d6vk5g_: 6vk5 G: [392686]
        Other proteins in same PDB: d6vk5a_, d6vk5b_, d6vk5d_, d6vk5e_, d6vk5f_, d6vk5h_
        automated match to d1mhyg_
        complexed with bez, cl, edo, fe
    3. Domain for 6vk6:
    4. Domain for 6vk7:
    5. Domains for 6vk8:
      1. Domain d6vk8c_: 6vk8 C: [392755]
        Other proteins in same PDB: d6vk8a_, d6vk8b_, d6vk8d_, d6vk8e_, d6vk8f_, d6vk8h_
        automated match to d1mhyg_
        complexed with bez, edo, fe, sin
      2. Domain d6vk8g_: 6vk8 G: [392673]
        Other proteins in same PDB: d6vk8a_, d6vk8b_, d6vk8d_, d6vk8e_, d6vk8f_, d6vk8h_
        automated match to d1mhyg_
        complexed with bez, edo, fe, sin
    6. Domain for 6yd0:
    7. Domain for 6ydi:
    8. Domain for 6ydu:
    9. Domain for 6yy3:
    10. Domains for 7m8q:
      1. Domain d7m8qc_: 7m8q C: [418363]
        Other proteins in same PDB: d7m8qa_, d7m8qb_, d7m8qd_, d7m8qe_, d7m8qf_, d7m8qh_
        automated match to d6vk6c_
        complexed with bez, edo, fe, ftr, na
      2. Domain d7m8qg_: 7m8q G: [418367]
        Other proteins in same PDB: d7m8qa_, d7m8qb_, d7m8qd_, d7m8qe_, d7m8qf_, d7m8qh_
        automated match to d6vk6c_
        complexed with bez, edo, fe, ftr, na
    11. Domains for 7m8r:
      1. Domain d7m8rc_: 7m8r C: [418371]
        Other proteins in same PDB: d7m8ra_, d7m8rb_, d7m8rd_, d7m8re_, d7m8rf_, d7m8rh_
        automated match to d6vk6c_
        complexed with bez, cl, edo, fe, w6x
      2. Domain d7m8rg_: 7m8r G: [418375]
        Other proteins in same PDB: d7m8ra_, d7m8rb_, d7m8rd_, d7m8re_, d7m8rf_, d7m8rh_
        automated match to d6vk6c_
        complexed with bez, cl, edo, fe, w6x

More info for Protein automated matches from a.23.3.1: Methane monooxygenase hydrolase, gamma subunit

Timeline for Protein automated matches from a.23.3.1: Methane monooxygenase hydrolase, gamma subunit: