SCOPe 2.08: Domain d5bkbb_: 5bkb B:

Lineage for d5bkbb_ (5bkb B:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
   one turn of helix is made by two pairs of antiparallel strands linked with short turns
   has appearance of a sandwich of distinct architecture and jelly-roll topology

4. Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families)
   Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold

5. Family b.82.2.0: automated matches [191672] (1 protein)
   not a true family

6. Protein automated matches [191281] (21 species)
   not a true protein

7. Species Delftia acidovorans [TaxId:80866] [369588] (4 PDB entries)

8. Domain d5bkbb_: 5bkb B: [369602]
   automated match to d1otja_
   complexed with akg, ftv, mn, peg, so4

Details for d5bkbb_

PDB Entry: 5bkb, 1.58 Å

PDB Description: crystal structure of aad-1 in complex with (r)-dichlorprop, mn(ii), and 2-oxoglutarate

PDB Compounds: (B:) (R)-phenoxypropionate/alpha-ketoglutarate-dioxygenase

SCOPe Domain Sequences for d5bkbb_:

Sequence, based on SEQRES records:

>d5bkbb_ b.82.2.0 (B:) automated matches {Delftia acidovorans [TaxId: 80866]}
rferiavqpltgvlgaeitgvdlreplddstwneildafhtyqviyfpgqaitneqhiaf
srrfgpvdpvpllksiegypevqmirreanesgrvigddwhtdstfldappaavvmraid
vpehggdtgflsmytawetlsptmqatieglnvvhsatrvfgslyqaqnrrfsntsvkvm
dvdagdretvhplvvthpgsgrkglyvnqvycqriegmtdaeskpllqflyehatrfdft
crvrwkkdqvlvwdnlctmhravpdyagkfryltrttvggvrpar

Sequence, based on observed residues (ATOM records):

>d5bkbb_ b.82.2.0 (B:) automated matches {Delftia acidovorans [TaxId: 80866]}
rferiavqpltgvlgaeitgvdlreplddstwneildafhtyqviyfpgqaitneqhiaf
srrfgpvdpvpllksiegypevqmirreanesgrvigddwhtdstfldappaavvmraid
vpehggdtgflsmytawetlsptmqatieglnvvhsatrvfgsldagdretvhplvvthp
gsgrkglyvnqvycqriegmtdaeskpllqflyehatrfdftcrvrwkkdqvlvwdnlct
mhravpdyagkfryltrttvggvrpar

Timeline for d5bkbb_:

• d5bkbb_ first appeared in SCOPe 2.07