SCOPe 2.08: Domain d6a2db2: 6a2d B:237-564

Lineage for d6a2db2 (6a2d B:237-564)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.0: automated matches [196408] (1 protein)
   not a true family

6. Protein automated matches [196409] (46 species)
   not a true protein

7. Species Santalum album [TaxId:35974] [367260] (11 PDB entries)

8. Domain d6a2db2: 6a2d B:237-564 [369554]
   Other proteins in same PDB: d6a2da1, d6a2db1
   automated match to d3m00a2
   complexed with 6r2, mg

Details for d6a2db2

PDB Entry: 6a2d, 1.96 Å

PDB Description: crystal structure of a synthase 2 from santalum album in complex with ligand1

PDB Compounds: (B:) Sesquisabinene B synthase 2

SCOPe Domain Sequences for d6a2db2:

Sequence, based on SEQRES records:

>d6a2db2 a.128.1.0 (B:237-564) automated matches {Santalum album [TaxId: 35974]}
vnltllryakldfnivqsfhqkeigrlsrwwvgtgldkmpfarngliqsymyaigmlfep
nlgevremeakvgalittiddvydvygtmeelelftditnrwdiskadqlprnirmpllt
mfntsndigywalkergfngipctakvwsdqlksytkeakwfheghkptleeyldnalvs
igfpnllvtsylltvenptkekldyvnslplfvrascilcriindlgtspdemergdnlk
siqcymneagasqevarehieglvrmwwkrlnkclfepspfaepflsftvnvvrgshffy
qygdgygnaeswtkkqgmsvlihpipln

Sequence, based on observed residues (ATOM records):

>d6a2db2 a.128.1.0 (B:237-564) automated matches {Santalum album [TaxId: 35974]}
vnltllryakldfnivqsfhqkeigrlsrwwvgtgldkmpfarngliqsymyaigmlfep
nlgevremeakvgalittiddvydvygtmeelelftditnrwdiskadqlprnirmpllt
mfntsndigywalkergfngipctakvwsdqlksytkeakwfheghkptleeyldnalvs
igfpnllvtsylltvenptkekldyvnslplfvrascilcriindlgtksiqcymnasqe
varehieglvrmwwkrlnkclfepspfaepflsftvnvvrgshffyqygdgygnaeswtk
kqgmsvlihpipln

Timeline for d6a2db2:

• d6a2db2 first appeared in SCOPe 2.07