SCOPe 2.07: Domain d6hbga_: 6hbg A:

Lineage for d6hbga_ (6hbg A:)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins)
   the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
   there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)

6. Protein automated matches [190854] (25 species)
   not a true protein

7. Species Echovirus e18 [TaxId:47506] [366473] (2 PDB entries)

8. Domain d6hbga_: 6hbg A: [369097]
   automated match to d1upna_
   complexed with gun, plm

Details for d6hbga_

PDB Entry: 6hbg, 3.16 Å

PDB Description: echovirus 18 native particle

PDB Compounds: (A:) Echovirus 18 viral protein 1

SCOPe Domain Sequences for d6hbga_:

Sequence, based on SEQRES records:

>d6hbga_ b.121.4.1 (A:) automated matches {Echovirus e18 [TaxId: 47506]}
tvantqpsgpsnsteipaltavetghtsqvdpsdtiqtrhvvnfhsrsestienfmgraa
cvfmdqykingeetstdrfavwtiniremaqlrrkcemftymrfdiemtmvitscqdqgt
ildqdmpvlthqimyvppggpipakvdgyewqtstnpsvfwtegnapprisipfisvgna
yssfydgwshftqdgtygyttlnamgklyirhvnrssphqitstirvyfkpkhikawvpr
pprlcpyinkrdvnfvvteitdsrtsitdtp

Sequence, based on observed residues (ATOM records):

>d6hbga_ b.121.4.1 (A:) automated matches {Echovirus e18 [TaxId: 47506]}
tvantqpsgpsnsteipaltavetghtsqvdpsdtiqtrhvvnfhsrsestienfmgraa
cvfmdqykinstdrfavwtiniremaqlrrkcemftymrfdiemtmvitscqdqdmpvlt
hqimyvppggpipakvdgyewqtstnpsvfwtegnapprisipfisvgnayssfydgwsh
ftqdgtygyttlnamgklyirhvnrssphqitstirvyfkpkhikawvprpprlcpyink
rdvnfvvteitdsrtsitdtp

Timeline for d6hbga_:

• d6hbga_ is new in SCOPe 2.07-stable
  
• d6hbga_ appears in the current release, SCOPe 2.08