SCOPe 2.08: Domain d6onab1: 6ona B:3-324

Lineage for d6onab1 (6ona B:3-324)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.0: automated matches [227246] (1 protein)
   not a true family

6. Protein automated matches [227017] (58 species)
   not a true protein

7. Species Influenza a virus (strain a/hickox/1940 h1n1) [TaxId:383543] [368445] (1 PDB entry)

8. Domain d6onab1: 6ona B:3-324 [368451]
   Other proteins in same PDB: d6onaa2, d6onaa3, d6onab2, d6onab3, d6onac2, d6onac3
   automated match to d4wsrd1
   complexed with cl, nag, peg

Details for d6onab1

PDB Entry: 6ona, 1.95 Å

PDB Description: crystal structure of influenza hemagglutinin from strain a/hickox/jy2/1940

PDB Compounds: (B:) Hemagglutinin

SCOPe Domain Sequences for d6onab1:

Sequence, based on SEQRES records:

>d6onab1 b.19.1.0 (B:3-324) automated matches {Influenza a virus (strain a/hickox/1940 h1n1) [TaxId: 383543]}
dticigyhannstdtvdtvleknvtvthsvnlledshngklcrlkgiaplqlgkcniagw
ilgnpecesllskrswsyiaetpnsengtcypgdfadyeelreqlssvssferfeifpke
rswpnhninigvtaacshagkssfyknllwltekdgsypnlnksyvnkkekevlvlwgvh
hpsnienqktlyrkenayvsvvssnynrrftpeiaerpkvrgqagrmnyywtllepgdti
ifeangnliapwyafalsrglgsgiitsnasmdecdtkcqtpqgainsslpfqnihpfti
gecpkyvrstklrmvtglrnip

Sequence, based on observed residues (ATOM records):

>d6onab1 b.19.1.0 (B:3-324) automated matches {Influenza a virus (strain a/hickox/1940 h1n1) [TaxId: 383543]}
dticigyhannstdtvdtvleknvtvthsvnlledshngklcrlkgiaplqlgkcniagw
ilgnpeckrswsyiaetpnsengtcypgdfadyeelreqlssvssferfeifpkerswpn
hninigvtaacshagkssfyknllwltekdgsypnlnksyvnkkekevlvlwgvhhpsni
enqktlyrkenayvsvvssnynrrftpeiaerpkvrgqagrmnyywtllepgdtiifean
gnliapwyafalsrglgsgiitsnasmdecdtkcqtpqgainsslpfqnihpftigecpk
yvrstklrmvtglrnip

Timeline for d6onab1:

• d6onab1 first appeared in SCOPe 2.07