SCOPe 2.08: Domain d5yd6d_: 5yd6 D:

Lineage for d5yd6d_ (5yd6 D:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Orphan nuclear receptor NURR1 [89142] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [89143] (3 PDB entries)

8. Domain d5yd6d_: 5yd6 D: [366982]
   automated match to d1ovle_
   complexed with 8su, mg

Details for d5yd6d_

PDB Entry: 5yd6, 2.34 Å

PDB Description: crystal structure of pg-bound nurr1-lbd

PDB Compounds: (D:) Nuclear receptor subfamily 4 group A member 2

SCOPe Domain Sequences for d5yd6d_:

Sequence, based on SEQRES records:

>d5yd6d_ a.123.1.1 (D:) Orphan nuclear receptor NURR1 {Human (Homo sapiens) [TaxId: 9606]}
ppvslisalvrahvdsnpamtsldysrfqanpdyqmsgddtqhiqqfydlltgsmeiirg
waekipgfadlpkadqdllfesaflelfvlrlayrsnpvegklifcngvvlhrlqcvrgf
gewidsivefssnlqnmnidisafsciaalamvterhglkepkrveelqnkivnclkdhv
tfnngglnrpnylskllgklpelrtlctqglqrifylkledlvpppaiidklfldtlpf

Sequence, based on observed residues (ATOM records):

>d5yd6d_ a.123.1.1 (D:) Orphan nuclear receptor NURR1 {Human (Homo sapiens) [TaxId: 9606]}
ppvslisalvrahvdsnpamtsldysrfqandtqhiqqfydlltgsmeiirgwaekipgf
adlpkadqdllfesaflelfvlrlayrsnpvegklifcngvvlhrlqcvrgfgewidsiv
efssnlqnmnidisafsciaalamvterhglkepkrveelqnkivnclkdhvtfnnpnyl
skllgklpelrtlctqglqrifylkledlvpppaiidklfldtlpf

Timeline for d5yd6d_:

• d5yd6d_ first appeared in SCOPe 2.07