SCOPe 2.08: Domain d6qkyd_: 6qky D:

Lineage for d6qkyd_ (6qky D:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families)

5. Family c.1.2.0: automated matches [191350] (1 protein)
   not a true family

6. Protein automated matches [190292] (36 species)
   not a true protein

7. Species Streptococcus pneumoniae [TaxId:170187] [319360] (2 PDB entries)

8. Domain d6qkyd_: 6qky D: [366934]
   Other proteins in same PDB: d6qkya2, d6qkyb2, d6qkyg2
   automated match to d5kinc_
   complexed with acy, gol, peg

Details for d6qkyd_

PDB Entry: 6qky, 2.54 Å

PDB Description: tryptophan synthase subunit alpha from streptococcus pneumoniae with 3d domain swap in the core of tim barrel

PDB Compounds: (D:) tryptophan synthase alpha chain

SCOPe Domain Sequences for d6qkyd_:

Sequence, based on SEQRES records:

>d6qkyd_ c.1.2.0 (D:) automated matches {Streptococcus pneumoniae [TaxId: 170187]}
mpktlteklnaikaagkgifvpyimagdhekgldglaetihfledlgvsaievgipfsdp
vadgpvieeaglrslahgtstqalvetlktieteiplvimtyfnplfqygvenfvkdlad
tavkgliipdlphehanfvepflantdialiplvslttgierqkeliegaegfiyavain
gvtgksgnyradldkhlaqlhqvadipvltgfgvssqadlerfnavsdgvivgskivkal
hqgepiqdfirqavayqk

Sequence, based on observed residues (ATOM records):

>d6qkyd_ c.1.2.0 (D:) automated matches {Streptococcus pneumoniae [TaxId: 170187]}
mpktlteklnaikaagkgifvpyimagdhekgldglaetihfledlgvsaievgipfsdp
vadgpvieeaglrslahgtstqalvetlktieteiplvimtyfnplfqygvenfvkdlad
tavkgliipdlphehanfvepflantdialiplvslttgierqkeliegaegfiyavain
ksgnyradldkhlaqlhqvadipvltgfgvssqadlerfnavsdgvivgskivkalhqge
piqdfirqavayqk

Timeline for d6qkyd_:

• d6qkyd_ first appeared in SCOPe 2.07