Lineage for d6qdxd_ (6qdx D:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2892669Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
  4. 2892670Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (61 families) (S)
  5. 2894468Family c.66.1.0: automated matches [191451] (1 protein)
    not a true family
  6. 2894469Protein automated matches [190689] (87 species)
    not a true protein
  7. 2894585Species Escherichia coli K-12 [TaxId:83333] [196426] (9 PDB entries)
  8. 2894599Domain d6qdxd_: 6qdx D: [366930]
    automated match to d4blwa_
    protein/RNA complex; complexed with hy8

Details for d6qdxd_

PDB Entry: 6qdx (more details), 2.1 Å

PDB Description: structure of e.coli rlmj in complex with a bisubstrate analogue (ba4)
PDB Compounds: (D:) Ribosomal RNA large subunit methyltransferase J

SCOPe Domain Sequences for d6qdxd_:

Sequence, based on SEQRES records: (download)

>d6qdxd_ c.66.1.0 (D:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
syrhsfhagnhadvlkhtvqsliieslkekdkpflyldthagagryqlgsehaertgkyl
egiariwqqddlpaeleayinvvkhfnrsgqlryypgspliarqllreqdslqltelhps
dypllrsefqkdsrarvekadgfqqlkaklppvsrrglilidppyemktdyqavvsgiae
gykrfatgtyalwypvvlrqqikrmihdleatgirkilqielavlpdsdrrgmtasgmiv
inppwkleqqmnnvlpwlhsklvpagtghatvswivpe

Sequence, based on observed residues (ATOM records): (download)

>d6qdxd_ c.66.1.0 (D:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
syrhsfhagnhadvlkhtvqsliieslkekdkpflyldthagagryqlgstgkylegiar
iwqqddlpaeleayinvvkhfnrsgqlryypgspliarqllreqdslqltelhpsdypll
rsefqkdsrarvekadgfqqlkaklppvsrrglilidppyemktdyqavvsgiaegykrf
atgtyalwypvvlrqqikrmihdleatgirkilqielavlpdsdrrgmtasgmivinppw
kleqqmnnvlpwlhsklvpagtghatvswivpe

SCOPe Domain Coordinates for d6qdxd_:

Click to download the PDB-style file with coordinates for d6qdxd_.
(The format of our PDB-style files is described here.)

Timeline for d6qdxd_: