Lineage for d5ymrc_ (5ymr C:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2850785Fold c.7: PFL-like glycyl radical enzymes [51997] (1 superfamily)
    contains: barrel, closed; n=10, S=10; accommodates a hairpin loop inside the barrel
  4. 2850786Superfamily c.7.1: PFL-like glycyl radical enzymes [51998] (6 families) (S)
    duplication: the N- and C-terminal halves have similar topologies
  5. 2850879Family c.7.1.0: automated matches [275322] (1 protein)
    not a true family
  6. 2850880Protein automated matches [275324] (7 species)
    not a true protein
  7. 2850929Species Desulfovibrio vulgaris [TaxId:882] [366653] (1 PDB entry)
  8. 2850932Domain d5ymrc_: 5ymr C: [366723]
    automated match to d1r9da_
    complexed with 8x3, gol

Details for d5ymrc_

PDB Entry: 5ymr (more details), 2.4 Å

PDB Description: the crystal structure of iseg
PDB Compounds: (C:) Formate acetyltransferase

SCOPe Domain Sequences for d5ymrc_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ymrc_ c.7.1.0 (C:) automated matches {Desulfovibrio vulgaris [TaxId: 882]}
vftilesfdntrpridverakyftesmkategqplplrwakalmhiaenmtvyiddhqli
cgragyqgrygvlypeldgdflgtaiedlpnraespfaitpaaaavvveeiapfwkgkty
healnlalpadvhkltyddpqglmsrfivnetssfrssiqwvhdyekvlkrgfrsikeea
lekiaaldpmspcdnvekrpfleaivivcdaiilwakrhaklaaelaaketdptrkrele
tmaeicawvpenpartfheavqaqwftqvfsrieqktgtivsngrmdqyfwpfyekdlae
gritedsalellecmwvgmaqyvdlyisptggafnegyahweavtiggqtpegrdatndl
tylflkskrefplhypdlaarihsrsperylwevaetikdgsgfpklindeevvplyvsk
gatfaealdyavsgctearmpnrdtytsggayinfaaalemvlyngkmlkygdtdlgaht
gdpcefktweefwnayvtqhhlflktafvqqhiinnlrarhfaqpmgsslhdlcmkhcld
lhtpqipeginlgyfeymgfgtvvdslsaikklvfedkkltmgeliealkcnfegkediq
qllksapcygnnddyadsiardidalsvkygrryspelgmhndvryvpftshvpfgrvvs
atpngrkawsalsdgssashgadvngptailqsnfnsknygmrdraarmlnikftpkcve
geegsqklvsfirtfcdlklwhvqfnvinketllaaqrdpekyrnlivriagysayfvdl
spdlqndliartghdvm

SCOPe Domain Coordinates for d5ymrc_:

Click to download the PDB-style file with coordinates for d5ymrc_.
(The format of our PDB-style files is described here.)

Timeline for d5ymrc_: